Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
VCX3BQ9H321 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VCX3BQ9H321 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.9■□□□□ 0.78
VCX3BQ9H321 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VCX3BQ9H321 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VCX3BQ9H321 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VCX3BQ9H321 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VCX3BQ9H321 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
VCX3BQ9H321 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
VCX3BQ9H321 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.89■□□□□ 0.78
VCX3BQ9H321 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
VCX3BQ9H321 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
VCX3BQ9H321 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VCX3BQ9H321 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VCX3BQ9H321 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VCX3BQ9H321 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
VCX3BQ9H321 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VCX3BQ9H321 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.89■□□□□ 0.77
VCX3BQ9H321 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
VCX3BQ9H321 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VCX3BQ9H321 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.89■□□□□ 0.77
VCX3BQ9H321 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VCX3BQ9H321 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.89■□□□□ 0.77
VCX3BQ9H321 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VCX3BQ9H321 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.89■□□□□ 0.77
VCX3BQ9H321 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
VCX3BQ9H321 AC016575.1-201ENST00000607026 382 ntBASIC19.89■□□□□ 0.77
VCX3BQ9H321 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VCX3BQ9H321 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VCX3BQ9H321 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
VCX3BQ9H321 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VCX3BQ9H321 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VCX3BQ9H321 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VCX3BQ9H321 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.88■□□□□ 0.77
VCX3BQ9H321 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.88■□□□□ 0.77
VCX3BQ9H321 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VCX3BQ9H321 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VCX3BQ9H321 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
VCX3BQ9H321 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.88■□□□□ 0.77
VCX3BQ9H321 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VCX3BQ9H321 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VCX3BQ9H321 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
VCX3BQ9H321 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.88■□□□□ 0.77
VCX3BQ9H321 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.88■□□□□ 0.77
VCX3BQ9H321 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VCX3BQ9H321 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
VCX3BQ9H321 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VCX3BQ9H321 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VCX3BQ9H321 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
VCX3BQ9H321 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VCX3BQ9H321 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
VCX3BQ9H321 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.87■□□□□ 0.77
VCX3BQ9H321 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
VCX3BQ9H321 AC022616.5-201ENST00000518796 181 ntBASIC19.87■□□□□ 0.77
VCX3BQ9H321 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
VCX3BQ9H321 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
VCX3BQ9H321 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VCX3BQ9H321 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
VCX3BQ9H321 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VCX3BQ9H321 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VCX3BQ9H321 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VCX3BQ9H321 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VCX3BQ9H321 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
VCX3BQ9H321 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
VCX3BQ9H321 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VCX3BQ9H321 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
VCX3BQ9H321 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
VCX3BQ9H321 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.86■□□□□ 0.77
VCX3BQ9H321 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.86■□□□□ 0.77
VCX3BQ9H321 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.86■□□□□ 0.77
VCX3BQ9H321 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VCX3BQ9H321 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.86■□□□□ 0.77
VCX3BQ9H321 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.86■□□□□ 0.77
VCX3BQ9H321 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.86■□□□□ 0.77
VCX3BQ9H321 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
VCX3BQ9H321 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.86■□□□□ 0.77
VCX3BQ9H321 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VCX3BQ9H321 AC020907.5-201ENST00000624372 1936 ntBASIC19.86■□□□□ 0.77
VCX3BQ9H321 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
VCX3BQ9H321 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
VCX3BQ9H321 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
VCX3BQ9H321 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VCX3BQ9H321 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VCX3BQ9H321 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VCX3BQ9H321 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
VCX3BQ9H321 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
VCX3BQ9H321 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
VCX3BQ9H321 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
VCX3BQ9H321 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.85■□□□□ 0.77
VCX3BQ9H321 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
VCX3BQ9H321 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VCX3BQ9H321 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VCX3BQ9H321 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.85■□□□□ 0.77
VCX3BQ9H321 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.85■□□□□ 0.77
VCX3BQ9H321 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VCX3BQ9H321 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.84■□□□□ 0.77
VCX3BQ9H321 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
VCX3BQ9H321 AF131216.4-201ENST00000638924 1588 ntBASIC19.84■□□□□ 0.77
VCX3BQ9H321 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
VCX3BQ9H321 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms