Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SPTBN4Q9H254 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SPTBN4Q9H254 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.28■□□□□ 0.84
SPTBN4Q9H254 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
SPTBN4Q9H254 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SPTBN4Q9H254 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
SPTBN4Q9H254 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SPTBN4Q9H254 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPTBN4Q9H254 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SPTBN4Q9H254 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.27■□□□□ 0.84
SPTBN4Q9H254 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.27■□□□□ 0.84
SPTBN4Q9H254 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPTBN4Q9H254 AC120498.10-201ENST00000621827 505 ntBASIC20.27■□□□□ 0.84
SPTBN4Q9H254 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPTBN4Q9H254 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPTBN4Q9H254 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.27■□□□□ 0.84
SPTBN4Q9H254 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
SPTBN4Q9H254 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
SPTBN4Q9H254 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SPTBN4Q9H254 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.27■□□□□ 0.83
SPTBN4Q9H254 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.27■□□□□ 0.83
SPTBN4Q9H254 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SPTBN4Q9H254 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPTBN4Q9H254 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPTBN4Q9H254 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.26■□□□□ 0.83
SPTBN4Q9H254 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SPTBN4Q9H254 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPTBN4Q9H254 DUSP8P3-201ENST00000399571 1760 ntBASIC20.26■□□□□ 0.83
SPTBN4Q9H254 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPTBN4Q9H254 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPTBN4Q9H254 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.26■□□□□ 0.83
SPTBN4Q9H254 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPTBN4Q9H254 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.26■□□□□ 0.83
SPTBN4Q9H254 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SPTBN4Q9H254 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.26■□□□□ 0.83
SPTBN4Q9H254 AL355355.2-201ENST00000442321 338 ntBASIC20.26■□□□□ 0.83
SPTBN4Q9H254 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPTBN4Q9H254 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.26■□□□□ 0.83
SPTBN4Q9H254 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.26■□□□□ 0.83
SPTBN4Q9H254 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.26■□□□□ 0.83
SPTBN4Q9H254 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.26■□□□□ 0.83
SPTBN4Q9H254 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.26■□□□□ 0.83
SPTBN4Q9H254 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.26■□□□□ 0.83
SPTBN4Q9H254 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SPTBN4Q9H254 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.25■□□□□ 0.83
SPTBN4Q9H254 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPTBN4Q9H254 CYP2D8P-201ENST00000433633 1490 ntBASIC20.25■□□□□ 0.83
SPTBN4Q9H254 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
SPTBN4Q9H254 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.25■□□□□ 0.83
SPTBN4Q9H254 RBM17P1-201ENST00000453646 1190 ntBASIC20.25■□□□□ 0.83
SPTBN4Q9H254 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SPTBN4Q9H254 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
SPTBN4Q9H254 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
SPTBN4Q9H254 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPTBN4Q9H254 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPTBN4Q9H254 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPTBN4Q9H254 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPTBN4Q9H254 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.25■□□□□ 0.83
SPTBN4Q9H254 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SPTBN4Q9H254 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.25■□□□□ 0.83
SPTBN4Q9H254 NUDT16P1-203ENST00000513809 620 ntBASIC20.25■□□□□ 0.83
SPTBN4Q9H254 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPTBN4Q9H254 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.24■□□□□ 0.83
SPTBN4Q9H254 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.24■□□□□ 0.83
SPTBN4Q9H254 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPTBN4Q9H254 AC010947.1-201ENST00000623454 693 ntBASIC20.24■□□□□ 0.83
SPTBN4Q9H254 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SPTBN4Q9H254 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.24■□□□□ 0.83
SPTBN4Q9H254 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPTBN4Q9H254 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPTBN4Q9H254 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.24■□□□□ 0.83
SPTBN4Q9H254 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
SPTBN4Q9H254 AP004607.7-201ENST00000527152 1677 ntBASIC20.24■□□□□ 0.83
SPTBN4Q9H254 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SPTBN4Q9H254 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
SPTBN4Q9H254 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.23■□□□□ 0.83
SPTBN4Q9H254 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.23■□□□□ 0.83
SPTBN4Q9H254 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SPTBN4Q9H254 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.23■□□□□ 0.83
SPTBN4Q9H254 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPTBN4Q9H254 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SPTBN4Q9H254 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.23■□□□□ 0.83
SPTBN4Q9H254 AP000550.4-202ENST00000639755 178 ntBASIC20.23■□□□□ 0.83
SPTBN4Q9H254 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SPTBN4Q9H254 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SPTBN4Q9H254 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPTBN4Q9H254 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPTBN4Q9H254 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPTBN4Q9H254 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPTBN4Q9H254 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPTBN4Q9H254 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.22■□□□□ 0.83
SPTBN4Q9H254 AL137013.1-201ENST00000432946 1228 ntBASIC20.22■□□□□ 0.83
SPTBN4Q9H254 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
SPTBN4Q9H254 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.22■□□□□ 0.83
SPTBN4Q9H254 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.22■□□□□ 0.83
SPTBN4Q9H254 AC110285.5-201ENST00000611501 352 ntBASIC20.22■□□□□ 0.83
SPTBN4Q9H254 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPTBN4Q9H254 MYC-208ENST00000641036 567 ntBASIC20.22■□□□□ 0.83
SPTBN4Q9H254 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SPTBN4Q9H254 AC079598.2-202ENST00000546624 1451 ntBASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms