Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
NBPF3Q9H094 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
NBPF3Q9H094 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC24.88■■□□□ 1.57
NBPF3Q9H094 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
NBPF3Q9H094 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
NBPF3Q9H094 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC24.88■■□□□ 1.57
NBPF3Q9H094 MDK-213ENST00000617138 635 ntTSL 2 BASIC24.88■■□□□ 1.57
NBPF3Q9H094 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
NBPF3Q9H094 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC24.88■■□□□ 1.57
NBPF3Q9H094 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC24.88■■□□□ 1.57
NBPF3Q9H094 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC24.88■■□□□ 1.57
NBPF3Q9H094 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
NBPF3Q9H094 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC24.87■■□□□ 1.57
NBPF3Q9H094 POU5F1P4-201ENST00000413175 1085 ntBASIC24.87■■□□□ 1.57
NBPF3Q9H094 KRT18P11-201ENST00000435214 1283 ntBASIC24.87■■□□□ 1.57
NBPF3Q9H094 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC24.87■■□□□ 1.57
NBPF3Q9H094 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC24.87■■□□□ 1.57
NBPF3Q9H094 AC142086.2-201ENST00000569753 217 ntBASIC24.87■■□□□ 1.57
NBPF3Q9H094 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC24.87■■□□□ 1.57
NBPF3Q9H094 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC24.87■■□□□ 1.57
NBPF3Q9H094 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
NBPF3Q9H094 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
NBPF3Q9H094 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC24.87■■□□□ 1.57
NBPF3Q9H094 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
NBPF3Q9H094 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
NBPF3Q9H094 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
NBPF3Q9H094 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
NBPF3Q9H094 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
NBPF3Q9H094 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC24.86■■□□□ 1.57
NBPF3Q9H094 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC24.86■■□□□ 1.57
NBPF3Q9H094 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC24.86■■□□□ 1.57
NBPF3Q9H094 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
NBPF3Q9H094 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
NBPF3Q9H094 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
NBPF3Q9H094 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
NBPF3Q9H094 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
NBPF3Q9H094 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC24.86■■□□□ 1.57
NBPF3Q9H094 AC008175.2-201ENST00000612840 297 ntBASIC24.86■■□□□ 1.57
NBPF3Q9H094 PARP1-210ENST00000629232 477 ntTSL 5 BASIC24.86■■□□□ 1.57
NBPF3Q9H094 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
NBPF3Q9H094 AC007375.3-201ENST00000600936 2314 ntBASIC24.86■■□□□ 1.57
NBPF3Q9H094 PALM-207ENST00000590161 2137 ntTSL 4 BASIC24.86■■□□□ 1.57
NBPF3Q9H094 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
NBPF3Q9H094 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC24.86■■□□□ 1.57
NBPF3Q9H094 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
NBPF3Q9H094 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC24.86■■□□□ 1.57
NBPF3Q9H094 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
NBPF3Q9H094 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
NBPF3Q9H094 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
NBPF3Q9H094 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
NBPF3Q9H094 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
NBPF3Q9H094 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
NBPF3Q9H094 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
NBPF3Q9H094 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC24.85■■□□□ 1.57
NBPF3Q9H094 BRI3-207ENST00000539286 699 ntTSL 2 BASIC24.85■■□□□ 1.57
NBPF3Q9H094 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC24.85■■□□□ 1.57
NBPF3Q9H094 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC24.85■■□□□ 1.57
NBPF3Q9H094 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
NBPF3Q9H094 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC24.85■■□□□ 1.57
NBPF3Q9H094 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
NBPF3Q9H094 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
NBPF3Q9H094 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC24.85■■□□□ 1.57
NBPF3Q9H094 KRT16P2-201ENST00000414673 1423 ntBASIC24.85■■□□□ 1.57
NBPF3Q9H094 AL024507.2-201ENST00000606070 2574 ntBASIC24.85■■□□□ 1.57
NBPF3Q9H094 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
NBPF3Q9H094 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
NBPF3Q9H094 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
NBPF3Q9H094 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC24.84■■□□□ 1.57
NBPF3Q9H094 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC24.84■■□□□ 1.57
NBPF3Q9H094 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC24.84■■□□□ 1.57
NBPF3Q9H094 SLC7A5P1-201ENST00000568957 537 ntBASIC24.84■■□□□ 1.57
NBPF3Q9H094 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC24.84■■□□□ 1.57
NBPF3Q9H094 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC24.84■■□□□ 1.57
NBPF3Q9H094 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
NBPF3Q9H094 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
NBPF3Q9H094 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC24.83■■□□□ 1.57
NBPF3Q9H094 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
NBPF3Q9H094 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
NBPF3Q9H094 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC24.83■■□□□ 1.57
NBPF3Q9H094 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC24.83■■□□□ 1.57
NBPF3Q9H094 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC24.83■■□□□ 1.57
NBPF3Q9H094 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
NBPF3Q9H094 KRT18P6-201ENST00000555540 1265 ntBASIC24.83■■□□□ 1.57
NBPF3Q9H094 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC24.83■■□□□ 1.57
NBPF3Q9H094 FGF8-207ENST00000618991 856 ntTSL 3 BASIC24.83■■□□□ 1.57
NBPF3Q9H094 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
NBPF3Q9H094 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
NBPF3Q9H094 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
NBPF3Q9H094 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC24.82■■□□□ 1.56
NBPF3Q9H094 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
NBPF3Q9H094 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
NBPF3Q9H094 DUX4L16-201ENST00000555130 1264 ntBASIC24.82■■□□□ 1.56
NBPF3Q9H094 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
NBPF3Q9H094 GAMT-205ENST00000640762 751 ntTSL 5 BASIC24.82■■□□□ 1.56
NBPF3Q9H094 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC24.82■■□□□ 1.56
NBPF3Q9H094 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
NBPF3Q9H094 AF106564.1-201ENST00000607058 2553 ntBASIC24.82■■□□□ 1.56
NBPF3Q9H094 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
NBPF3Q9H094 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
NBPF3Q9H094 FEM1AP4-201ENST00000443167 1987 ntBASIC24.82■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms