Protein–RNA interactions for Protein: Q99728

BARD1, BRCA1-associated RING domain protein 1, humanhuman

Known RBP Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1Q99728 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
BARD1Q99728 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BARD1Q99728 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.95■□□□□ 0.78
BARD1Q99728 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
BARD1Q99728 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
BARD1Q99728 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.95■□□□□ 0.78
BARD1Q99728 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.95■□□□□ 0.78
BARD1Q99728 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.95■□□□□ 0.78
BARD1Q99728 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BARD1Q99728 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.95■□□□□ 0.78
BARD1Q99728 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BARD1Q99728 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.95■□□□□ 0.78
BARD1Q99728 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
BARD1Q99728 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
BARD1Q99728 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.95■□□□□ 0.78
BARD1Q99728 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BARD1Q99728 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BARD1Q99728 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.95■□□□□ 0.78
BARD1Q99728 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
BARD1Q99728 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.94■□□□□ 0.78
BARD1Q99728 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
BARD1Q99728 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.94■□□□□ 0.78
BARD1Q99728 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BARD1Q99728 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BARD1Q99728 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.94■□□□□ 0.78
BARD1Q99728 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
BARD1Q99728 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BARD1Q99728 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.94■□□□□ 0.78
BARD1Q99728 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.94■□□□□ 0.78
BARD1Q99728 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.94■□□□□ 0.78
BARD1Q99728 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.94■□□□□ 0.78
BARD1Q99728 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
BARD1Q99728 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BARD1Q99728 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BARD1Q99728 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
BARD1Q99728 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.94■□□□□ 0.78
BARD1Q99728 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
BARD1Q99728 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.94■□□□□ 0.78
BARD1Q99728 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.94■□□□□ 0.78
BARD1Q99728 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
BARD1Q99728 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BARD1Q99728 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BARD1Q99728 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BARD1Q99728 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
BARD1Q99728 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.93■□□□□ 0.78
BARD1Q99728 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
BARD1Q99728 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
BARD1Q99728 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BARD1Q99728 AC104771.1-201ENST00000603335 964 ntBASIC19.93■□□□□ 0.78
BARD1Q99728 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.93■□□□□ 0.78
BARD1Q99728 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.93■□□□□ 0.78
BARD1Q99728 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
BARD1Q99728 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
BARD1Q99728 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
BARD1Q99728 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BARD1Q99728 AC004854.2-201ENST00000608450 1441 ntBASIC19.93■□□□□ 0.78
BARD1Q99728 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.92■□□□□ 0.78
BARD1Q99728 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
BARD1Q99728 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BARD1Q99728 BX005040.4-201ENST00000637145 1518 ntBASIC19.92■□□□□ 0.78
BARD1Q99728 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.92■□□□□ 0.78
BARD1Q99728 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.92■□□□□ 0.78
BARD1Q99728 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BARD1Q99728 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BARD1Q99728 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
BARD1Q99728 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BARD1Q99728 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BARD1Q99728 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.92■□□□□ 0.78
BARD1Q99728 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BARD1Q99728 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
BARD1Q99728 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.92■□□□□ 0.78
BARD1Q99728 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.92■□□□□ 0.78
BARD1Q99728 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.92■□□□□ 0.78
BARD1Q99728 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
BARD1Q99728 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
BARD1Q99728 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
BARD1Q99728 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
BARD1Q99728 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.92■□□□□ 0.78
BARD1Q99728 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.92■□□□□ 0.78
BARD1Q99728 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BARD1Q99728 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
BARD1Q99728 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BARD1Q99728 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
BARD1Q99728 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BARD1Q99728 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.91■□□□□ 0.78
BARD1Q99728 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.91■□□□□ 0.78
BARD1Q99728 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BARD1Q99728 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.91■□□□□ 0.78
BARD1Q99728 BID-214ENST00000617586 542 ntTSL 5 BASIC19.91■□□□□ 0.78
BARD1Q99728 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BARD1Q99728 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
BARD1Q99728 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.91■□□□□ 0.78
BARD1Q99728 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
BARD1Q99728 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BARD1Q99728 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
BARD1Q99728 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
BARD1Q99728 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BARD1Q99728 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
BARD1Q99728 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
BARD1Q99728 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms