Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP1S3Q96PC3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP1S3Q96PC3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP1S3Q96PC3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP1S3Q96PC3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC15.75■□□□□ 0.11
AP1S3Q96PC3 AC137630.3-201ENST00000607245 391 ntBASIC15.75■□□□□ 0.11
AP1S3Q96PC3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC15.75■□□□□ 0.11
AP1S3Q96PC3 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP1S3Q96PC3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP1S3Q96PC3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP1S3Q96PC3 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP1S3Q96PC3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
AP1S3Q96PC3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
AP1S3Q96PC3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC15.75■□□□□ 0.11
AP1S3Q96PC3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
AP1S3Q96PC3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP1S3Q96PC3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP1S3Q96PC3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP1S3Q96PC3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP1S3Q96PC3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP1S3Q96PC3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
AP1S3Q96PC3 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP1S3Q96PC3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
AP1S3Q96PC3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
AP1S3Q96PC3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
AP1S3Q96PC3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.74■□□□□ 0.11
AP1S3Q96PC3 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP1S3Q96PC3 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
AP1S3Q96PC3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP1S3Q96PC3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC15.74■□□□□ 0.11
AP1S3Q96PC3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
AP1S3Q96PC3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC15.74■□□□□ 0.11
AP1S3Q96PC3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP1S3Q96PC3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP1S3Q96PC3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP1S3Q96PC3 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP1S3Q96PC3 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP1S3Q96PC3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
AP1S3Q96PC3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC15.74■□□□□ 0.11
AP1S3Q96PC3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC15.74■□□□□ 0.11
AP1S3Q96PC3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC15.74■□□□□ 0.11
AP1S3Q96PC3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
AP1S3Q96PC3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC15.74■□□□□ 0.11
AP1S3Q96PC3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP1S3Q96PC3 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP1S3Q96PC3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC15.74■□□□□ 0.11
AP1S3Q96PC3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP1S3Q96PC3 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP1S3Q96PC3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
AP1S3Q96PC3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
AP1S3Q96PC3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP1S3Q96PC3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP1S3Q96PC3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
AP1S3Q96PC3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
AP1S3Q96PC3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP1S3Q96PC3 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP1S3Q96PC3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
AP1S3Q96PC3 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.73■□□□□ 0.11
AP1S3Q96PC3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP1S3Q96PC3 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP1S3Q96PC3 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
AP1S3Q96PC3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
AP1S3Q96PC3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC15.73■□□□□ 0.11
AP1S3Q96PC3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC15.73■□□□□ 0.11
AP1S3Q96PC3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC15.73■□□□□ 0.11
AP1S3Q96PC3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
AP1S3Q96PC3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP1S3Q96PC3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
AP1S3Q96PC3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
AP1S3Q96PC3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
AP1S3Q96PC3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP1S3Q96PC3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP1S3Q96PC3 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
AP1S3Q96PC3 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
AP1S3Q96PC3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC15.73■□□□□ 0.11
AP1S3Q96PC3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP1S3Q96PC3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC15.73■□□□□ 0.11
AP1S3Q96PC3 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP1S3Q96PC3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP1S3Q96PC3 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
AP1S3Q96PC3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP1S3Q96PC3 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
AP1S3Q96PC3 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.72■□□□□ 0.11
AP1S3Q96PC3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC15.72■□□□□ 0.11
AP1S3Q96PC3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC15.72■□□□□ 0.11
AP1S3Q96PC3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC15.72■□□□□ 0.11
AP1S3Q96PC3 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP1S3Q96PC3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP1S3Q96PC3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
AP1S3Q96PC3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP1S3Q96PC3 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP1S3Q96PC3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
AP1S3Q96PC3 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP1S3Q96PC3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC15.72■□□□□ 0.11
AP1S3Q96PC3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
AP1S3Q96PC3 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP1S3Q96PC3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP1S3Q96PC3 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC15.72■□□□□ 0.11
AP1S3Q96PC3 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP1S3Q96PC3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms