Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP6Q96FZ7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21■□□□□ 0.95
CHMP6Q96FZ7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21■□□□□ 0.95
CHMP6Q96FZ7 AC092028.1-203ENST00000608262 953 ntBASIC21■□□□□ 0.95
CHMP6Q96FZ7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP6Q96FZ7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21■□□□□ 0.95
CHMP6Q96FZ7 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP6Q96FZ7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21■□□□□ 0.95
CHMP6Q96FZ7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21■□□□□ 0.95
CHMP6Q96FZ7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP6Q96FZ7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CHMP6Q96FZ7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP6Q96FZ7 AC020907.5-201ENST00000624372 1936 ntBASIC21■□□□□ 0.95
CHMP6Q96FZ7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.99■□□□□ 0.95
CHMP6Q96FZ7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP6Q96FZ7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP6Q96FZ7 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP6Q96FZ7 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP6Q96FZ7 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CHMP6Q96FZ7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.99■□□□□ 0.95
CHMP6Q96FZ7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP6Q96FZ7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP6Q96FZ7 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP6Q96FZ7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.99■□□□□ 0.95
CHMP6Q96FZ7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.99■□□□□ 0.95
CHMP6Q96FZ7 AC112907.3-201ENST00000577781 2400 ntBASIC20.99■□□□□ 0.95
CHMP6Q96FZ7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP6Q96FZ7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP6Q96FZ7 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.99■□□□□ 0.95
CHMP6Q96FZ7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.99■□□□□ 0.95
CHMP6Q96FZ7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP6Q96FZ7 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP6Q96FZ7 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP6Q96FZ7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
CHMP6Q96FZ7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP6Q96FZ7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP6Q96FZ7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
CHMP6Q96FZ7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
CHMP6Q96FZ7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP6Q96FZ7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP6Q96FZ7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP6Q96FZ7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.98■□□□□ 0.95
CHMP6Q96FZ7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP6Q96FZ7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP6Q96FZ7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.98■□□□□ 0.95
CHMP6Q96FZ7 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP6Q96FZ7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP6Q96FZ7 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP6Q96FZ7 AC018445.3-201ENST00000624177 1945 ntBASIC20.98■□□□□ 0.95
CHMP6Q96FZ7 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP6Q96FZ7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.97■□□□□ 0.95
CHMP6Q96FZ7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP6Q96FZ7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP6Q96FZ7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CHMP6Q96FZ7 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CHMP6Q96FZ7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CHMP6Q96FZ7 MIR6722-201ENST00000617286 78 ntBASIC20.97■□□□□ 0.95
CHMP6Q96FZ7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.97■□□□□ 0.95
CHMP6Q96FZ7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CHMP6Q96FZ7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP6Q96FZ7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CHMP6Q96FZ7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.97■□□□□ 0.95
CHMP6Q96FZ7 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CHMP6Q96FZ7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP6Q96FZ7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP6Q96FZ7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP6Q96FZ7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP6Q96FZ7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP6Q96FZ7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CHMP6Q96FZ7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP6Q96FZ7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.96■□□□□ 0.95
CHMP6Q96FZ7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP6Q96FZ7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.96■□□□□ 0.95
CHMP6Q96FZ7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP6Q96FZ7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.96■□□□□ 0.95
CHMP6Q96FZ7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.96■□□□□ 0.95
CHMP6Q96FZ7 AL031602.1-201ENST00000633169 911 ntBASIC20.96■□□□□ 0.95
CHMP6Q96FZ7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP6Q96FZ7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP6Q96FZ7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CHMP6Q96FZ7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP6Q96FZ7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP6Q96FZ7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP6Q96FZ7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
CHMP6Q96FZ7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
CHMP6Q96FZ7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP6Q96FZ7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.95■□□□□ 0.94
CHMP6Q96FZ7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP6Q96FZ7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP6Q96FZ7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CHMP6Q96FZ7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CHMP6Q96FZ7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP6Q96FZ7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP6Q96FZ7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP6Q96FZ7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.95■□□□□ 0.94
CHMP6Q96FZ7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP6Q96FZ7 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP6Q96FZ7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP6Q96FZ7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.95■□□□□ 0.94
CHMP6Q96FZ7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms