Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
TRIM11Q96F44 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
TRIM11Q96F44 AC006128.1-201ENST00000624704 1661 ntBASIC22.07■■□□□ 1.12
TRIM11Q96F44 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TRIM11Q96F44 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TRIM11Q96F44 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC22.07■■□□□ 1.12
TRIM11Q96F44 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TRIM11Q96F44 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TRIM11Q96F44 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC22.07■■□□□ 1.12
TRIM11Q96F44 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
TRIM11Q96F44 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TRIM11Q96F44 MIR638-201ENST00000385237 100 ntBASIC22.07■■□□□ 1.12
TRIM11Q96F44 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TRIM11Q96F44 POU5F1P4-201ENST00000413175 1085 ntBASIC22.07■■□□□ 1.12
TRIM11Q96F44 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.07■■□□□ 1.12
TRIM11Q96F44 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
TRIM11Q96F44 AC008175.2-201ENST00000612840 297 ntBASIC22.07■■□□□ 1.12
TRIM11Q96F44 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC22.07■■□□□ 1.12
TRIM11Q96F44 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TRIM11Q96F44 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
TRIM11Q96F44 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TRIM11Q96F44 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TRIM11Q96F44 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC22.07■■□□□ 1.12
TRIM11Q96F44 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TRIM11Q96F44 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TRIM11Q96F44 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TRIM11Q96F44 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
TRIM11Q96F44 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.06■■□□□ 1.12
TRIM11Q96F44 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC22.06■■□□□ 1.12
TRIM11Q96F44 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
TRIM11Q96F44 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TRIM11Q96F44 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
TRIM11Q96F44 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.06■■□□□ 1.12
TRIM11Q96F44 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TRIM11Q96F44 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TRIM11Q96F44 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC22.06■■□□□ 1.12
TRIM11Q96F44 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
TRIM11Q96F44 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TRIM11Q96F44 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
TRIM11Q96F44 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.06■■□□□ 1.12
TRIM11Q96F44 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
TRIM11Q96F44 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
TRIM11Q96F44 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC22.05■■□□□ 1.12
TRIM11Q96F44 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC22.05■■□□□ 1.12
TRIM11Q96F44 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TRIM11Q96F44 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
TRIM11Q96F44 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
TRIM11Q96F44 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.05■■□□□ 1.12
TRIM11Q96F44 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC22.05■■□□□ 1.12
TRIM11Q96F44 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.05■■□□□ 1.12
TRIM11Q96F44 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TRIM11Q96F44 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TRIM11Q96F44 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC22.05■■□□□ 1.12
TRIM11Q96F44 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
TRIM11Q96F44 AC121338.2-201ENST00000622535 1744 ntBASIC22.05■■□□□ 1.12
TRIM11Q96F44 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TRIM11Q96F44 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC22.04■■□□□ 1.12
TRIM11Q96F44 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC22.04■■□□□ 1.12
TRIM11Q96F44 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRIM11Q96F44 ERF-202ENST00000440177 2032 ntTSL 2 BASIC22.04■■□□□ 1.12
TRIM11Q96F44 AC061975.6-201ENST00000579045 1553 ntBASIC22.04■■□□□ 1.12
TRIM11Q96F44 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRIM11Q96F44 LINC02228-203ENST00000641970 1355 ntBASIC22.04■■□□□ 1.12
TRIM11Q96F44 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
TRIM11Q96F44 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRIM11Q96F44 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRIM11Q96F44 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRIM11Q96F44 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRIM11Q96F44 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC22.04■■□□□ 1.12
TRIM11Q96F44 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC22.04■■□□□ 1.12
TRIM11Q96F44 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC22.04■■□□□ 1.12
TRIM11Q96F44 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TRIM11Q96F44 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TRIM11Q96F44 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TRIM11Q96F44 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC22.04■■□□□ 1.12
TRIM11Q96F44 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
TRIM11Q96F44 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRIM11Q96F44 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
TRIM11Q96F44 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC22.04■■□□□ 1.12
TRIM11Q96F44 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM11Q96F44 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM11Q96F44 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM11Q96F44 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM11Q96F44 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.03■■□□□ 1.12
TRIM11Q96F44 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.03■■□□□ 1.12
TRIM11Q96F44 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM11Q96F44 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
TRIM11Q96F44 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
TRIM11Q96F44 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC22.02■■□□□ 1.12
TRIM11Q96F44 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC22.02■■□□□ 1.12
TRIM11Q96F44 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TRIM11Q96F44 PLK5-205ENST00000642079 1969 ntBASIC22.02■■□□□ 1.12
TRIM11Q96F44 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
TRIM11Q96F44 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRIM11Q96F44 AC138907.5-202ENST00000569484 235 ntBASIC22.02■■□□□ 1.12
TRIM11Q96F44 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TRIM11Q96F44 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRIM11Q96F44 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRIM11Q96F44 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.11
TRIM11Q96F44 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms