Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CLDND2Q8NHS1 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDND2Q8NHS1 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
CLDND2Q8NHS1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLDND2Q8NHS1 EEF1DP3-203ENST00000566025 782 ntBASIC17.73■□□□□ 0.43
CLDND2Q8NHS1 AL050303.2-201ENST00000619798 666 ntBASIC17.73■□□□□ 0.43
CLDND2Q8NHS1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLDND2Q8NHS1 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLDND2Q8NHS1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDND2Q8NHS1 AC139530.1-201ENST00000575312 1977 ntBASIC17.73■□□□□ 0.43
CLDND2Q8NHS1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLDND2Q8NHS1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLDND2Q8NHS1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDND2Q8NHS1 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDND2Q8NHS1 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDND2Q8NHS1 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDND2Q8NHS1 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.72■□□□□ 0.43
CLDND2Q8NHS1 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CLDND2Q8NHS1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.72■□□□□ 0.43
CLDND2Q8NHS1 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDND2Q8NHS1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDND2Q8NHS1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDND2Q8NHS1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDND2Q8NHS1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDND2Q8NHS1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDND2Q8NHS1 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.72■□□□□ 0.43
CLDND2Q8NHS1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.72■□□□□ 0.43
CLDND2Q8NHS1 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.72■□□□□ 0.43
CLDND2Q8NHS1 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.72■□□□□ 0.43
CLDND2Q8NHS1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.72■□□□□ 0.43
CLDND2Q8NHS1 AC053503.5-201ENST00000601508 636 ntBASIC17.72■□□□□ 0.43
CLDND2Q8NHS1 AC005181.1-201ENST00000604782 1256 ntBASIC17.72■□□□□ 0.43
CLDND2Q8NHS1 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDND2Q8NHS1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDND2Q8NHS1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDND2Q8NHS1 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDND2Q8NHS1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDND2Q8NHS1 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLDND2Q8NHS1 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.71■□□□□ 0.43
CLDND2Q8NHS1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.71■□□□□ 0.43
CLDND2Q8NHS1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDND2Q8NHS1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CLDND2Q8NHS1 AC026310.3-201ENST00000625186 2373 ntBASIC17.71■□□□□ 0.43
CLDND2Q8NHS1 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.71■□□□□ 0.43
CLDND2Q8NHS1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.71■□□□□ 0.43
CLDND2Q8NHS1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.71■□□□□ 0.43
CLDND2Q8NHS1 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDND2Q8NHS1 AL121832.2-201ENST00000610979 668 ntBASIC17.71■□□□□ 0.43
CLDND2Q8NHS1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CLDND2Q8NHS1 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDND2Q8NHS1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDND2Q8NHS1 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.71■□□□□ 0.43
CLDND2Q8NHS1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDND2Q8NHS1 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CLDND2Q8NHS1 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CLDND2Q8NHS1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CLDND2Q8NHS1 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDND2Q8NHS1 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.7■□□□□ 0.42
CLDND2Q8NHS1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.7■□□□□ 0.42
CLDND2Q8NHS1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDND2Q8NHS1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDND2Q8NHS1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDND2Q8NHS1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.7■□□□□ 0.42
CLDND2Q8NHS1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLDND2Q8NHS1 AC010536.3-201ENST00000620306 533 ntBASIC17.7■□□□□ 0.42
CLDND2Q8NHS1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.7■□□□□ 0.42
CLDND2Q8NHS1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.7■□□□□ 0.42
CLDND2Q8NHS1 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CLDND2Q8NHS1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLDND2Q8NHS1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLDND2Q8NHS1 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.7■□□□□ 0.42
CLDND2Q8NHS1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDND2Q8NHS1 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLDND2Q8NHS1 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDND2Q8NHS1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDND2Q8NHS1 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDND2Q8NHS1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.69■□□□□ 0.42
CLDND2Q8NHS1 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDND2Q8NHS1 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.69■□□□□ 0.42
CLDND2Q8NHS1 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDND2Q8NHS1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDND2Q8NHS1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDND2Q8NHS1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.69■□□□□ 0.42
CLDND2Q8NHS1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.69■□□□□ 0.42
CLDND2Q8NHS1 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
CLDND2Q8NHS1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLDND2Q8NHS1 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDND2Q8NHS1 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.69■□□□□ 0.42
CLDND2Q8NHS1 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.69■□□□□ 0.42
CLDND2Q8NHS1 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.69■□□□□ 0.42
CLDND2Q8NHS1 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CLDND2Q8NHS1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDND2Q8NHS1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDND2Q8NHS1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CLDND2Q8NHS1 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.69■□□□□ 0.42
CLDND2Q8NHS1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDND2Q8NHS1 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDND2Q8NHS1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDND2Q8NHS1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDND2Q8NHS1 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms