Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.77■□□□□ 0.76
SLC38A9Q8NBW4 AC133561.1-201ENST00000568600 2415 ntBASIC19.77■□□□□ 0.76
SLC38A9Q8NBW4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC38A9Q8NBW4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC38A9Q8NBW4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
SLC38A9Q8NBW4 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC38A9Q8NBW4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC38A9Q8NBW4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC38A9Q8NBW4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC38A9Q8NBW4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC38A9Q8NBW4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.76■□□□□ 0.75
SLC38A9Q8NBW4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC38A9Q8NBW4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC38A9Q8NBW4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC38A9Q8NBW4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC38A9Q8NBW4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.76■□□□□ 0.75
SLC38A9Q8NBW4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.76■□□□□ 0.75
SLC38A9Q8NBW4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC38A9Q8NBW4 AC092118.2-201ENST00000613495 667 ntBASIC19.76■□□□□ 0.75
SLC38A9Q8NBW4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
SLC38A9Q8NBW4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC38A9Q8NBW4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC38A9Q8NBW4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
SLC38A9Q8NBW4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.76■□□□□ 0.75
SLC38A9Q8NBW4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC38A9Q8NBW4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC38A9Q8NBW4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SLC38A9Q8NBW4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SLC38A9Q8NBW4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.75■□□□□ 0.75
SLC38A9Q8NBW4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SLC38A9Q8NBW4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC38A9Q8NBW4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SLC38A9Q8NBW4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC38A9Q8NBW4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SLC38A9Q8NBW4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SLC38A9Q8NBW4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.75■□□□□ 0.75
SLC38A9Q8NBW4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC38A9Q8NBW4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLC38A9Q8NBW4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC38A9Q8NBW4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC38A9Q8NBW4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC38A9Q8NBW4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLC38A9Q8NBW4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC38A9Q8NBW4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.74■□□□□ 0.75
SLC38A9Q8NBW4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC38A9Q8NBW4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLC38A9Q8NBW4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLC38A9Q8NBW4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC38A9Q8NBW4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC38A9Q8NBW4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.74■□□□□ 0.75
SLC38A9Q8NBW4 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.74■□□□□ 0.75
SLC38A9Q8NBW4 TMEM191A-211ENST00000637163 1067 ntBASIC19.74■□□□□ 0.75
SLC38A9Q8NBW4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC38A9Q8NBW4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.74■□□□□ 0.75
SLC38A9Q8NBW4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SLC38A9Q8NBW4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC38A9Q8NBW4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC38A9Q8NBW4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SLC38A9Q8NBW4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLC38A9Q8NBW4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC38A9Q8NBW4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
SLC38A9Q8NBW4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC38A9Q8NBW4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SLC38A9Q8NBW4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC38A9Q8NBW4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.73■□□□□ 0.75
SLC38A9Q8NBW4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.73■□□□□ 0.75
SLC38A9Q8NBW4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.73■□□□□ 0.75
SLC38A9Q8NBW4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC38A9Q8NBW4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.73■□□□□ 0.75
SLC38A9Q8NBW4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.73■□□□□ 0.75
SLC38A9Q8NBW4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SLC38A9Q8NBW4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SLC38A9Q8NBW4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC38A9Q8NBW4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.73■□□□□ 0.75
SLC38A9Q8NBW4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.73■□□□□ 0.75
SLC38A9Q8NBW4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SLC38A9Q8NBW4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC38A9Q8NBW4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC38A9Q8NBW4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SLC38A9Q8NBW4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
SLC38A9Q8NBW4 AC245052.3-201ENST00000450182 901 ntBASIC19.72■□□□□ 0.75
SLC38A9Q8NBW4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC38A9Q8NBW4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC38A9Q8NBW4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.72■□□□□ 0.75
SLC38A9Q8NBW4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC38A9Q8NBW4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC38A9Q8NBW4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC38A9Q8NBW4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC38A9Q8NBW4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC38A9Q8NBW4 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC38A9Q8NBW4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC38A9Q8NBW4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
SLC38A9Q8NBW4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC38A9Q8NBW4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.71■□□□□ 0.75
SLC38A9Q8NBW4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC38A9Q8NBW4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC38A9Q8NBW4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC38A9Q8NBW4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.71■□□□□ 0.75
SLC38A9Q8NBW4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.71■□□□□ 0.75
SLC38A9Q8NBW4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms