Protein–RNA interactions for Protein: Q8N1V2

CFAP52, Cilia- and flagella-associated protein 52, humanhuman

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP52Q8N1V2 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CFAP52Q8N1V2 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CFAP52Q8N1V2 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.54■■□□□ 1.04
CFAP52Q8N1V2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.54■■□□□ 1.04
CFAP52Q8N1V2 AC013268.1-206ENST00000638368 961 ntBASIC21.54■■□□□ 1.04
CFAP52Q8N1V2 AC112229.1-201ENST00000639295 961 ntBASIC21.54■■□□□ 1.04
CFAP52Q8N1V2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CFAP52Q8N1V2 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
CFAP52Q8N1V2 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CFAP52Q8N1V2 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.54■■□□□ 1.04
CFAP52Q8N1V2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.54■■□□□ 1.04
CFAP52Q8N1V2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CFAP52Q8N1V2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.54■■□□□ 1.04
CFAP52Q8N1V2 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CFAP52Q8N1V2 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CFAP52Q8N1V2 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CFAP52Q8N1V2 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CFAP52Q8N1V2 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CFAP52Q8N1V2 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CFAP52Q8N1V2 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CFAP52Q8N1V2 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CFAP52Q8N1V2 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CFAP52Q8N1V2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CFAP52Q8N1V2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CFAP52Q8N1V2 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.53■■□□□ 1.04
CFAP52Q8N1V2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CFAP52Q8N1V2 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.53■■□□□ 1.04
CFAP52Q8N1V2 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.53■■□□□ 1.04
CFAP52Q8N1V2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.53■■□□□ 1.04
CFAP52Q8N1V2 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.53■■□□□ 1.04
CFAP52Q8N1V2 LINC00565-201ENST00000562710 2331 ntBASIC21.53■■□□□ 1.04
CFAP52Q8N1V2 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CFAP52Q8N1V2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CFAP52Q8N1V2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CFAP52Q8N1V2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
CFAP52Q8N1V2 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.53■■□□□ 1.04
CFAP52Q8N1V2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CFAP52Q8N1V2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CFAP52Q8N1V2 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CFAP52Q8N1V2 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CFAP52Q8N1V2 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.52■■□□□ 1.04
CFAP52Q8N1V2 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.52■■□□□ 1.04
CFAP52Q8N1V2 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CFAP52Q8N1V2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CFAP52Q8N1V2 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CFAP52Q8N1V2 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.52■■□□□ 1.04
CFAP52Q8N1V2 ID1-201ENST00000376105 1233 ntBASIC21.52■■□□□ 1.04
CFAP52Q8N1V2 HLA-L-209ENST00000420110 1011 ntBASIC21.52■■□□□ 1.04
CFAP52Q8N1V2 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CFAP52Q8N1V2 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.52■■□□□ 1.04
CFAP52Q8N1V2 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.52■■□□□ 1.04
CFAP52Q8N1V2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CFAP52Q8N1V2 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CFAP52Q8N1V2 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CFAP52Q8N1V2 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CFAP52Q8N1V2 AC244015.2-201ENST00000616358 1861 ntBASIC21.52■■□□□ 1.03
CFAP52Q8N1V2 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.51■■□□□ 1.03
CFAP52Q8N1V2 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.51■■□□□ 1.03
CFAP52Q8N1V2 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CFAP52Q8N1V2 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CFAP52Q8N1V2 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CFAP52Q8N1V2 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CFAP52Q8N1V2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CFAP52Q8N1V2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CFAP52Q8N1V2 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.51■■□□□ 1.03
CFAP52Q8N1V2 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.51■■□□□ 1.03
CFAP52Q8N1V2 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CFAP52Q8N1V2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.51■■□□□ 1.03
CFAP52Q8N1V2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CFAP52Q8N1V2 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.51■■□□□ 1.03
CFAP52Q8N1V2 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.51■■□□□ 1.03
CFAP52Q8N1V2 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.51■■□□□ 1.03
CFAP52Q8N1V2 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CFAP52Q8N1V2 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CFAP52Q8N1V2 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CFAP52Q8N1V2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
CFAP52Q8N1V2 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.51■■□□□ 1.03
CFAP52Q8N1V2 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CFAP52Q8N1V2 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CFAP52Q8N1V2 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CFAP52Q8N1V2 AC068338.2-201ENST00000563278 1430 ntBASIC21.5■■□□□ 1.03
CFAP52Q8N1V2 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CFAP52Q8N1V2 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CFAP52Q8N1V2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.5■■□□□ 1.03
CFAP52Q8N1V2 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.5■■□□□ 1.03
CFAP52Q8N1V2 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CFAP52Q8N1V2 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CFAP52Q8N1V2 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CFAP52Q8N1V2 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CFAP52Q8N1V2 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CFAP52Q8N1V2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CFAP52Q8N1V2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CFAP52Q8N1V2 NCF1B-203ENST00000435988 1254 ntBASIC21.49■■□□□ 1.03
CFAP52Q8N1V2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CFAP52Q8N1V2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.49■■□□□ 1.03
CFAP52Q8N1V2 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.49■■□□□ 1.03
CFAP52Q8N1V2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CFAP52Q8N1V2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
CFAP52Q8N1V2 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.49■■□□□ 1.03
CFAP52Q8N1V2 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms