Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHPFQ8IZ52 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.31■■□□□ 1
CHPFQ8IZ52 AL162412.1-201ENST00000567129 965 ntBASIC21.31■■□□□ 1
CHPFQ8IZ52 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.31■■□□□ 1
CHPFQ8IZ52 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.31■■□□□ 1
CHPFQ8IZ52 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHPFQ8IZ52 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.3■■□□□ 1
CHPFQ8IZ52 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHPFQ8IZ52 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHPFQ8IZ52 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHPFQ8IZ52 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.3■■□□□ 1
CHPFQ8IZ52 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHPFQ8IZ52 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CHPFQ8IZ52 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.3■■□□□ 1
CHPFQ8IZ52 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHPFQ8IZ52 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.3■■□□□ 1
CHPFQ8IZ52 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHPFQ8IZ52 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
CHPFQ8IZ52 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CHPFQ8IZ52 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.3■■□□□ 1
CHPFQ8IZ52 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHPFQ8IZ52 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.29■■□□□ 1
CHPFQ8IZ52 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CHPFQ8IZ52 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.29■■□□□ 1
CHPFQ8IZ52 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHPFQ8IZ52 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.29■■□□□ 1
CHPFQ8IZ52 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.29■■□□□ 1
CHPFQ8IZ52 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.29■■□□□ 1
CHPFQ8IZ52 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.29■■□□□ 1
CHPFQ8IZ52 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.29■■□□□ 1
CHPFQ8IZ52 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.29■■□□□ 1
CHPFQ8IZ52 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.29■■□□□ 1
CHPFQ8IZ52 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.29■■□□□ 1
CHPFQ8IZ52 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHPFQ8IZ52 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.29■■□□□ 1
CHPFQ8IZ52 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.29■■□□□ 1
CHPFQ8IZ52 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.29■■□□□ 1
CHPFQ8IZ52 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHPFQ8IZ52 AC127496.7-201ENST00000625110 1798 ntBASIC21.28■■□□□ 1
CHPFQ8IZ52 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHPFQ8IZ52 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHPFQ8IZ52 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CHPFQ8IZ52 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHPFQ8IZ52 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.28■■□□□ 1
CHPFQ8IZ52 RARRES2P4-201ENST00000514074 484 ntBASIC21.28■■□□□ 1
CHPFQ8IZ52 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CHPFQ8IZ52 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.28■■□□□ 1
CHPFQ8IZ52 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CHPFQ8IZ52 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CHPFQ8IZ52 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.28■■□□□ 1
CHPFQ8IZ52 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.27■■□□□ 1
CHPFQ8IZ52 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CHPFQ8IZ52 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
CHPFQ8IZ52 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CHPFQ8IZ52 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHPFQ8IZ52 LINC00565-201ENST00000562710 2331 ntBASIC21.27■■□□□ 1
CHPFQ8IZ52 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.27■■□□□ 1
CHPFQ8IZ52 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHPFQ8IZ52 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CHPFQ8IZ52 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
CHPFQ8IZ52 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.27■■□□□ 1
CHPFQ8IZ52 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.27■■□□□ 1
CHPFQ8IZ52 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHPFQ8IZ52 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHPFQ8IZ52 AC010980.2-201ENST00000587099 1412 ntBASIC21.27■■□□□ 1
CHPFQ8IZ52 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHPFQ8IZ52 AC026471.6-201ENST00000622954 1905 ntBASIC21.27■■□□□ 1
CHPFQ8IZ52 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
CHPFQ8IZ52 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHPFQ8IZ52 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.26■□□□□ 0.99
CHPFQ8IZ52 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHPFQ8IZ52 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHPFQ8IZ52 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
CHPFQ8IZ52 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHPFQ8IZ52 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHPFQ8IZ52 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHPFQ8IZ52 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.26■□□□□ 0.99
CHPFQ8IZ52 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.26■□□□□ 0.99
CHPFQ8IZ52 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
CHPFQ8IZ52 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHPFQ8IZ52 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHPFQ8IZ52 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHPFQ8IZ52 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHPFQ8IZ52 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.25■□□□□ 0.99
CHPFQ8IZ52 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHPFQ8IZ52 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.25■□□□□ 0.99
CHPFQ8IZ52 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.25■□□□□ 0.99
CHPFQ8IZ52 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CHPFQ8IZ52 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHPFQ8IZ52 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CHPFQ8IZ52 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHPFQ8IZ52 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHPFQ8IZ52 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHPFQ8IZ52 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHPFQ8IZ52 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.24■□□□□ 0.99
CHPFQ8IZ52 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.24■□□□□ 0.99
CHPFQ8IZ52 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHPFQ8IZ52 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CHPFQ8IZ52 POU5F1P3-201ENST00000428824 1078 ntBASIC21.24■□□□□ 0.99
CHPFQ8IZ52 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms