Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP1BQ7LBR1 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
CHMP1BQ7LBR1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.17■□□□□ 0.66
CHMP1BQ7LBR1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.17■□□□□ 0.66
CHMP1BQ7LBR1 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.17■□□□□ 0.66
CHMP1BQ7LBR1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.17■□□□□ 0.66
CHMP1BQ7LBR1 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CHMP1BQ7LBR1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP1BQ7LBR1 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP1BQ7LBR1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.17■□□□□ 0.66
CHMP1BQ7LBR1 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP1BQ7LBR1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP1BQ7LBR1 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP1BQ7LBR1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP1BQ7LBR1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP1BQ7LBR1 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP1BQ7LBR1 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP1BQ7LBR1 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP1BQ7LBR1 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.16■□□□□ 0.66
CHMP1BQ7LBR1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP1BQ7LBR1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.16■□□□□ 0.66
CHMP1BQ7LBR1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP1BQ7LBR1 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP1BQ7LBR1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.16■□□□□ 0.66
CHMP1BQ7LBR1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.16■□□□□ 0.66
CHMP1BQ7LBR1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.16■□□□□ 0.66
CHMP1BQ7LBR1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
CHMP1BQ7LBR1 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.16■□□□□ 0.66
CHMP1BQ7LBR1 IKBKGP1-201ENST00000612193 1073 ntBASIC19.16■□□□□ 0.66
CHMP1BQ7LBR1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP1BQ7LBR1 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP1BQ7LBR1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.16■□□□□ 0.66
CHMP1BQ7LBR1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP1BQ7LBR1 AC055733.4-201ENST00000638462 1354 ntBASIC19.16■□□□□ 0.66
CHMP1BQ7LBR1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP1BQ7LBR1 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP1BQ7LBR1 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.15■□□□□ 0.66
CHMP1BQ7LBR1 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.15■□□□□ 0.66
CHMP1BQ7LBR1 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP1BQ7LBR1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP1BQ7LBR1 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.15■□□□□ 0.66
CHMP1BQ7LBR1 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CHMP1BQ7LBR1 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP1BQ7LBR1 AC242852.2-201ENST00000615738 1807 ntBASIC19.15■□□□□ 0.66
CHMP1BQ7LBR1 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP1BQ7LBR1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP1BQ7LBR1 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CHMP1BQ7LBR1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.15■□□□□ 0.66
CHMP1BQ7LBR1 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP1BQ7LBR1 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP1BQ7LBR1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CHMP1BQ7LBR1 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP1BQ7LBR1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP1BQ7LBR1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
CHMP1BQ7LBR1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.15■□□□□ 0.66
CHMP1BQ7LBR1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CHMP1BQ7LBR1 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHMP1BQ7LBR1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHMP1BQ7LBR1 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.14■□□□□ 0.65
CHMP1BQ7LBR1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP1BQ7LBR1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.14■□□□□ 0.65
CHMP1BQ7LBR1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.14■□□□□ 0.65
CHMP1BQ7LBR1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP1BQ7LBR1 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.14■□□□□ 0.65
CHMP1BQ7LBR1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.14■□□□□ 0.65
CHMP1BQ7LBR1 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CHMP1BQ7LBR1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP1BQ7LBR1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP1BQ7LBR1 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.14■□□□□ 0.65
CHMP1BQ7LBR1 AP006587.3-201ENST00000525742 1516 ntBASIC19.14■□□□□ 0.65
CHMP1BQ7LBR1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP1BQ7LBR1 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CHMP1BQ7LBR1 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.14■□□□□ 0.65
CHMP1BQ7LBR1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP1BQ7LBR1 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CHMP1BQ7LBR1 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP1BQ7LBR1 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP1BQ7LBR1 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP1BQ7LBR1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.13■□□□□ 0.65
CHMP1BQ7LBR1 AC004911.1-201ENST00000416316 871 ntBASIC19.13■□□□□ 0.65
CHMP1BQ7LBR1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.13■□□□□ 0.65
CHMP1BQ7LBR1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP1BQ7LBR1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP1BQ7LBR1 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.13■□□□□ 0.65
CHMP1BQ7LBR1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP1BQ7LBR1 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.13■□□□□ 0.65
CHMP1BQ7LBR1 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP1BQ7LBR1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CHMP1BQ7LBR1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CHMP1BQ7LBR1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.13■□□□□ 0.65
CHMP1BQ7LBR1 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP1BQ7LBR1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.13■□□□□ 0.65
CHMP1BQ7LBR1 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP1BQ7LBR1 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP1BQ7LBR1 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.12■□□□□ 0.65
CHMP1BQ7LBR1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP1BQ7LBR1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP1BQ7LBR1 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP1BQ7LBR1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.12■□□□□ 0.65
CHMP1BQ7LBR1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms