Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 TMEM120A-209ENST00000480899 765 ntTSL 512.46□□□□□ -0.413e-9■■■□□ 18.7
LARP4Q71RC2 COPZ1-204ENST00000548281 554 ntTSL 410.92□□□□□ -0.663e-6■■■□□ 18.7
LARP4Q71RC2 COPZ1-213ENST00000551962 578 ntTSL 510.73□□□□□ -0.693e-6■■■□□ 18.7
LARP4Q71RC2 COPZ1-214ENST00000552218 797 ntTSL 5 BASIC9.73□□□□□ -0.853e-6■■■□□ 18.7
LARP4Q71RC2 COPZ1-212ENST00000551779 1462 ntAPPRIS ALT1 TSL 2 BASIC8.94□□□□□ -0.983e-6■■■□□ 18.7
LARP4Q71RC2 COPZ1-208ENST00000550027 553 ntTSL 1 (best)7.97□□□□□ -1.133e-6■■■□□ 18.7
LARP4Q71RC2 COPZ1-215ENST00000552362 575 ntTSL 4 BASIC7.73□□□□□ -1.173e-6■■■□□ 18.7
LARP4Q71RC2 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.223e-9■■■□□ 18.7
LARP4Q71RC2 PSMC6-217ENST00000557632 611 ntTSL 26.94□□□□□ -1.33e-9■■■□□ 18.7
LARP4Q71RC2 PSMC6-209ENST00000555175 752 ntTSL 36.6□□□□□ -1.353e-9■■■□□ 18.7
LARP4Q71RC2 PSMC6-216ENST00000557557 2939 ntTSL 26.53□□□□□ -1.363e-9■■■□□ 18.7
LARP4Q71RC2 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.393e-9■■■□□ 18.7
LARP4Q71RC2 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.433e-9■■■□□ 18.7
LARP4Q71RC2 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.8□□□□□ -1.483e-6■■■□□ 18.7
LARP4Q71RC2 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.8□□□□□ -1.483e-6■■■□□ 18.7
LARP4Q71RC2 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.633e-9■■■□□ 18.7
LARP4Q71RC2 SNX17-202ENST00000427123 2007 ntTSL 219.19■□□□□ 0.663e-7■■■□□ 18.7
LARP4Q71RC2 SNX17-203ENST00000440760 1955 ntTSL 1 (best)18.54■□□□□ 0.563e-7■■■□□ 18.7
LARP4Q71RC2 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.483e-7■■■□□ 18.7
LARP4Q71RC2 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.26■□□□□ 0.353e-7■■■□□ 18.7
LARP4Q71RC2 SNX17-204ENST00000453453 1638 ntTSL 1 (best)15.29■□□□□ 0.043e-7■■■□□ 18.7
LARP4Q71RC2 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.841e-13■■■□□ 18.6
LARP4Q71RC2 CYP27A1-205ENST00000494263 2566 ntTSL 217.89■□□□□ 0.461e-13■■■□□ 18.6
LARP4Q71RC2 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC12.28□□□□□ -0.445e-8■■■□□ 18.6
LARP4Q71RC2 BAG6-235ENST00000362049 3626 ntTSL 2 BASIC12.05□□□□□ -0.485e-8■■■□□ 18.6
LARP4Q71RC2 BAG6-234ENST00000211379 3779 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.575e-8■■■□□ 18.6
LARP4Q71RC2 BAG6-236ENST00000375964 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.65e-8■■■□□ 18.6
LARP4Q71RC2 BAG6-237ENST00000375976 3644 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.65e-8■■■□□ 18.6
LARP4Q71RC2 ISOC2-204ENST00000587226 854 ntTSL 515.4■□□□□ 0.068e-7■■■□□ 18.6
LARP4Q71RC2 ISOC2-205ENST00000589080 763 ntTSL 213.81□□□□□ -0.28e-7■■■□□ 18.6
LARP4Q71RC2 SNRPG-208ENST00000482975 1093 ntTSL 1 (best) BASIC9.64□□□□□ -0.873e-7■■■□□ 18.6
LARP4Q71RC2 SNRPG-204ENST00000438261 515 ntTSL 2 BASIC8.8□□□□□ -13e-7■■■□□ 18.6
LARP4Q71RC2 SNRPG-203ENST00000429728 566 ntTSL 27.97□□□□□ -1.133e-7■■■□□ 18.6
LARP4Q71RC2 SNRPG-201ENST00000272348 625 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.283e-7■■■□□ 18.6
LARP4Q71RC2 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.79□□□□□ -1.483e-7■■■□□ 18.6
LARP4Q71RC2 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.66□□□□□ -1.823e-7■■■□□ 18.6
LARP4Q71RC2 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.66□□□□□ -1.823e-7■■■□□ 18.6
LARP4Q71RC2 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.632e-7■■■□□ 18.6
LARP4Q71RC2 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.122e-7■■■□□ 18.6
LARP4Q71RC2 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.032e-7■■■□□ 18.6
LARP4Q71RC2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.591e-6■■■□□ 18.6
LARP4Q71RC2 EMD-208ENST00000492448 832 ntTSL 216.94■□□□□ 0.31e-8■■■□□ 18.6
LARP4Q71RC2 EMD-207ENST00000486738 1284 ntTSL 316.12■□□□□ 0.173e-8■■■□□ 18.6
LARP4Q71RC2 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC25.19■■□□□ 1.623e-12■■■□□ 18.6
LARP4Q71RC2 SIGMAR1-204ENST00000461426 939 ntTSL 1 (best)24.49■■□□□ 1.513e-12■■■□□ 18.6
LARP4Q71RC2 CLMN-202ENST00000553733 565 ntTSL 416.55■□□□□ 0.245e-6■■■□□ 18.6
LARP4Q71RC2 CLMN-204ENST00000555615 685 ntTSL 59.29□□□□□ -0.925e-6■■■□□ 18.6
LARP4Q71RC2 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.495e-6■■■□□ 18.6
LARP4Q71RC2 CLMN-203ENST00000555336 718 ntTSL 55.36□□□□□ -1.555e-6■■■□□ 18.6
LARP4Q71RC2 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.228e-7■■■□□ 18.6
LARP4Q71RC2 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.068e-7■■■□□ 18.6
LARP4Q71RC2 STT3A-201ENST00000392708 4558 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.842e-10■■■□□ 18.6
LARP4Q71RC2 STT3A-205ENST00000525946 1383 ntTSL 26.06□□□□□ -1.442e-10■■■□□ 18.6
LARP4Q71RC2 STT3A-207ENST00000526364 617 ntTSL 34.84□□□□□ -1.632e-10■■■□□ 18.6
LARP4Q71RC2 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.164e-9■■■□□ 18.5
LARP4Q71RC2 TMEM120A-204ENST00000440632 1352 ntTSL 516.07■□□□□ 0.164e-9■■■□□ 18.5
LARP4Q71RC2 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.66■□□□□ 0.14e-9■■■□□ 18.5
LARP4Q71RC2 TMEM120A-213ENST00000490656 660 ntTSL 314.72□□□□□ -0.054e-9■■■□□ 18.5
LARP4Q71RC2 TMEM120A-210ENST00000484946 610 ntTSL 214.72□□□□□ -0.054e-9■■■□□ 18.5
LARP4Q71RC2 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.72□□□□□ -0.054e-9■■■□□ 18.5
LARP4Q71RC2 TMEM120A-215ENST00000493251 641 ntTSL 313.92□□□□□ -0.184e-9■■■□□ 18.5
LARP4Q71RC2 TMEM120A-205ENST00000460127 408 ntTSL 312.17□□□□□ -0.464e-9■■■□□ 18.5
LARP4Q71RC2 ICAM1-201ENST00000264832 3252 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.739e-10■■■□□ 18.5
LARP4Q71RC2 NT5C-202ENST00000577523 776 ntTSL 219.47■□□□□ 0.717e-8■■■□□ 18.5
LARP4Q71RC2 NT5C-213ENST00000583655 1315 ntTSL 219.28■□□□□ 0.687e-8■■■□□ 18.5
LARP4Q71RC2 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.577e-8■■■□□ 18.5
LARP4Q71RC2 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.25■□□□□ 0.357e-8■■■□□ 18.5
LARP4Q71RC2 NT5C-209ENST00000580758 958 ntTSL 217.04■□□□□ 0.327e-8■■■□□ 18.5
LARP4Q71RC2 NT5C-205ENST00000578407 720 ntTSL 316.48■□□□□ 0.237e-8■■■□□ 18.5
LARP4Q71RC2 NT5C-208ENST00000580423 450 ntTSL 216.09■□□□□ 0.177e-8■■■□□ 18.5
LARP4Q71RC2 NT5C-212ENST00000582744 921 ntTSL 215.2■□□□□ 0.027e-8■■■□□ 18.5
LARP4Q71RC2 APOC4-APOC2-201ENST00000585685 1829 ntTSL 516.47■□□□□ 0.233e-12■■■□□ 18.5
LARP4Q71RC2 APOC2-201ENST00000252490 727 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.693e-12■■■□□ 18.5
LARP4Q71RC2 APOC4-APOC2-202ENST00000589057 680 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.83e-12■■■□□ 18.5
LARP4Q71RC2 APOC2-202ENST00000585786 880 ntTSL 2 BASIC7.39□□□□□ -1.233e-12■■■□□ 18.5
LARP4Q71RC2 APOC2-204ENST00000591597 447 ntTSL 5 BASIC7.39□□□□□ -1.233e-12■■■□□ 18.5
LARP4Q71RC2 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.343e-12■■■□□ 18.5
LARP4Q71RC2 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.68□□□□□ -1.53e-12■■■□□ 18.5
LARP4Q71RC2 SNRPD2-207ENST00000588599 805 ntTSL 3 BASIC10.46□□□□□ -0.736e-9■■■□□ 18.5
LARP4Q71RC2 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.132e-7■■■□□ 18.5
LARP4Q71RC2 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.082e-7■■■□□ 18.5
LARP4Q71RC2 DPM3-202ENST00000368399 517 ntBASIC13.35□□□□□ -0.272e-7■■■□□ 18.5
LARP4Q71RC2 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.682e-6■■■□□ 18.5
LARP4Q71RC2 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.74■□□□□ 0.432e-7■■■□□ 18.5
LARP4Q71RC2 PAIP2-206ENST00000510409 815 ntTSL 217.57■□□□□ 0.42e-7■■■□□ 18.5
LARP4Q71RC2 PAIP2-204ENST00000507755 776 ntTSL 517.04■□□□□ 0.322e-7■■■□□ 18.5
LARP4Q71RC2 PAIP2-207ENST00000511381 365 ntTSL 514□□□□□ -0.172e-7■■■□□ 18.5
LARP4Q71RC2 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.172e-7■■■□□ 18.5
LARP4Q71RC2 PAIP2-203ENST00000507415 423 ntTSL 313.76□□□□□ -0.212e-7■■■□□ 18.5
LARP4Q71RC2 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.68□□□□□ -0.222e-6■■■□□ 18.5
LARP4Q71RC2 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.222e-6■■■□□ 18.5
LARP4Q71RC2 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC13□□□□□ -0.339e-12■■■□□ 18.5
LARP4Q71RC2 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.442e-7■■■□□ 18.5
LARP4Q71RC2 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.465e-8■■■□□ 18.5
LARP4Q71RC2 ZNF638-217ENST00000483421 2076 ntTSL 25.06□□□□□ -1.65e-8■■■□□ 18.5
LARP4Q71RC2 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.622e-7■■■□□ 18.5
LARP4Q71RC2 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.755e-8■■■□□ 18.5
LARP4Q71RC2 ZNF638-219ENST00000487638 4233 ntTSL 1 (best)2.07□□□□□ -2.085e-8■■■□□ 18.5
LARP4Q71RC2 ZNF638-202ENST00000409407 4470 ntTSL 21.76□□□□□ -2.135e-8■■■□□ 18.5
LARP4Q71RC2 YIF1A-207ENST00000484814 541 ntTSL 319.07■□□□□ 0.646e-8■■■□□ 18.5
Retrieved 100 of 15,922 protein–RNA pairs in 367.1 ms