RNA–Protein interactions for RNA: ENST00000555336.6

CLMN-203, Transcript of calmin, humanhuman

TSL 5

Gene CLMN, Length 718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMN-203ENST00000555336 AEBP2Q6ZN18 517 aaPredicted RBP17.68■□□□□ 0.42
CLMN-203ENST00000555336 CHIC1Q5VXU3 224 aa17.01■□□□□ 0.31
CLMN-203ENST00000555336 PHF23Q9BUL5 403 aaPredicted RBP15□□□□□ -0.01
CLMN-203ENST00000555336 SENP3Q9H4L4 574 aaPredicted RBP14.98□□□□□ -0.01
CLMN-203ENST00000555336 PLPPR3Q6T4P5 718 aa14.01□□□□□ -0.17
CLMN-203ENST00000555336 FOXD1Q16676 465 aa13.97□□□□□ -0.17
CLMN-203ENST00000555336 PPP6R1Q9UPN7 881 aa13.29□□□□□ -0.28
CLMN-203ENST00000555336 ADRA2BP18089 450 aa13.27□□□□□ -0.29
CLMN-203ENST00000555336 PIAS4Q8N2W9 510 aaPredicted RBP13.11□□□□□ -0.31
CLMN-203ENST00000555336 MSH5O43196 834 aa12.92□□□□□ -0.34
CLMN-203ENST00000555336 KCNA4P22459 653 aa12.58□□□□□ -0.4
CLMN-203ENST00000555336 PPP4R3CPQ6ZMV5 832 aa12.38□□□□□ -0.43
CLMN-203ENST00000555336 POTEDQ86YR6 584 aa12.23□□□□□ -0.45
CLMN-203ENST00000555336 NCBP3Q53F19 620 aaKnown RBP12.19□□□□□ -0.46
CLMN-203ENST00000555336 EHMT2Q96KQ7 1210 aa12.19□□□□□ -0.46
CLMN-203ENST00000555336 MAPK8IP2Q13387 824 aaPredicted RBP12.11□□□□□ -0.47
CLMN-203ENST00000555336 SLC4A1APQ9BWU0 796 aaKnown RBP12.06□□□□□ -0.48
CLMN-203ENST00000555336 SCAF1Q9H7N4 1312 aaKnown RBP12.05□□□□□ -0.48
CLMN-203ENST00000555336 NPM3O75607 178 aaKnown RBP12.01□□□□□ -0.49
CLMN-203ENST00000555336 CNKSR2Q8WXI2 1034 aa11.95□□□□□ -0.5
CLMN-203ENST00000555336 DMRT2Q9Y5R5 561 aa11.94□□□□□ -0.5
CLMN-203ENST00000555336 CSRNP3Q8WYN3 585 aa11.88□□□□□ -0.51
CLMN-203ENST00000555336 DNAJC5BQ9UF47 199 aa11.66□□□□□ -0.54
CLMN-203ENST00000555336 RNF216Q9NWF9 866 aaPredicted RBP11.62□□□□□ -0.55
CLMN-203ENST00000555336 ZBTB22O15209 634 aa11.59□□□□□ -0.55
CLMN-203ENST00000555336 HOXD11P31277 338 aaPredicted RBP11.58□□□□□ -0.56
CLMN-203ENST00000555336 NISCHQ9Y2I1 1504 aa11.56□□□□□ -0.56
CLMN-203ENST00000555336 FOXD4L1Q9NU39 408 aa11.47□□□□□ -0.57
CLMN-203ENST00000555336 DCAF8L1A6NGE4 600 aa11.46□□□□□ -0.57
CLMN-203ENST00000555336 SLC4A2P04920 1241 aa11.24□□□□□ -0.61
CLMN-203ENST00000555336 MYCNP04198 464 aaPredicted RBP11.1□□□□□ -0.63
CLMN-203ENST00000555336 RNF39Q9H2S5 420 aa11.09□□□□□ -0.63
CLMN-203ENST00000555336 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.06□□□□□ -0.64
CLMN-203ENST00000555336 ATXN8OSP0DMR3 200 aa11.05□□□□□ -0.64
CLMN-203ENST00000555336 ABCC9O60706 1549 aa10.98□□□□□ -0.65
CLMN-203ENST00000555336 CACNB1Q02641 598 aaPredicted RBP10.96□□□□□ -0.65
CLMN-203ENST00000555336 C1QBPQ07021 282 aaKnown RBP10.91□□□□□ -0.66
CLMN-203ENST00000555336 U3KPZ7 1027 aaPredicted RBP10.87□□□□□ -0.67
CLMN-203ENST00000555336 PELP1Q8IZL8 1130 aaKnown RBP10.84□□□□□ -0.67
CLMN-203ENST00000555336 MYT1Q01538 1121 aa10.82□□□□□ -0.68
CLMN-203ENST00000555336 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.81□□□□□ -0.68
CLMN-203ENST00000555336 HNRNPUL2Q1KMD3 747 aaKnown RBP10.81□□□□□ -0.68
CLMN-203ENST00000555336 SAMD1Q6SPF0 538 aaPredicted RBP10.79□□□□□ -0.68
CLMN-203ENST00000555336 ATF5Q9Y2D1 282 aaPredicted RBP10.75□□□□□ -0.69
CLMN-203ENST00000555336 FKBP8Q14318 412 aa10.7□□□□□ -0.7
CLMN-203ENST00000555336 SPINK5Q9NQ38 1064 aaPredicted RBP10.65□□□□□ -0.7
CLMN-203ENST00000555336 CAPN15O75808 1086 aa10.6□□□□□ -0.71
CLMN-203ENST00000555336 APLP2Q06481 763 aa10.59□□□□□ -0.71
CLMN-203ENST00000555336 AMER1Q5JTC6 1135 aaPredicted RBP10.54□□□□□ -0.72
CLMN-203ENST00000555336 ZNF219Q9P2Y4 722 aaPredicted RBP10.53□□□□□ -0.72
CLMN-203ENST00000555336 TTBK1Q5TCY1 1321 aaPredicted RBP10.52□□□□□ -0.73
CLMN-203ENST00000555336 TRHP20396 242 aaPredicted RBP10.5□□□□□ -0.73
CLMN-203ENST00000555336 RTN4Q9NQC3 1192 aaKnown RBP10.5□□□□□ -0.73
CLMN-203ENST00000555336 CCDC180Q9P1Z9 1646 aa10.48□□□□□ -0.73
CLMN-203ENST00000555336 DSG3P32926 999 aa10.47□□□□□ -0.73
CLMN-203ENST00000555336 ABCB7O75027 752 aa10.41□□□□□ -0.74
CLMN-203ENST00000555336 MKRN4PQ13434 485 aaPredicted RBP10.31□□□□□ -0.76
CLMN-203ENST00000555336 SPDYE4A6NLX3 237 aa10.29□□□□□ -0.76
CLMN-203ENST00000555336 FBLN2P98095 1184 aa10.28□□□□□ -0.76
CLMN-203ENST00000555336 POLA2Q14181 598 aa10.27□□□□□ -0.77
CLMN-203ENST00000555336 SLC24A1O60721 1099 aa10.24□□□□□ -0.77
CLMN-203ENST00000555336 PABPN1Q86U42 306 aaKnown RBP eCLIP10.23□□□□□ -0.77
CLMN-203ENST00000555336 FBXO3Q9UK99 471 aa10.23□□□□□ -0.77
CLMN-203ENST00000555336 RB1CC1Q8TDY2 1594 aa10.22□□□□□ -0.77
CLMN-203ENST00000555336 PROM2Q8N271 834 aa10.22□□□□□ -0.77
CLMN-203ENST00000555336 DNAJC5Q9H3Z4 198 aa10.17□□□□□ -0.78
CLMN-203ENST00000555336 ZBTB12Q9Y330 459 aaPredicted RBP10.15□□□□□ -0.78
CLMN-203ENST00000555336 DCAF8L2P0C7V8 631 aa10.07□□□□□ -0.8
CLMN-203ENST00000555336 NACADO15069 1562 aa10.06□□□□□ -0.8
CLMN-203ENST00000555336 VASPP50552 380 aaPredicted RBP10.06□□□□□ -0.8
CLMN-203ENST00000555336 ERICH6Q7L0X2 663 aa10.01□□□□□ -0.81
CLMN-203ENST00000555336 UNC13AQ9UPW8 1703 aa9.97□□□□□ -0.81
CLMN-203ENST00000555336 PRKCSHP14314 528 aaPredicted RBP9.97□□□□□ -0.81
CLMN-203ENST00000555336 IFNLR1Q8IU57 520 aaPredicted RBP9.96□□□□□ -0.82
CLMN-203ENST00000555336 OSCARQ8IYS5 282 aa9.95□□□□□ -0.82
CLMN-203ENST00000555336 BICRAQ9NZM4 1560 aa9.95□□□□□ -0.82
CLMN-203ENST00000555336 CECR2Q9BXF3 1484 aa9.93□□□□□ -0.82
CLMN-203ENST00000555336 RBM42Q9BTD8 480 aaKnown RBP9.93□□□□□ -0.82
CLMN-203ENST00000555336 ZNF692Q9BU19 519 aaPredicted RBP9.92□□□□□ -0.82
CLMN-203ENST00000555336 SPDYE2BA6NHP3 402 aa9.91□□□□□ -0.82
CLMN-203ENST00000555336 SPDYE6P0CI01 402 aa9.91□□□□□ -0.82
CLMN-203ENST00000555336 SPDYE2Q495Y8 402 aa9.91□□□□□ -0.82
CLMN-203ENST00000555336 SSUH2Q9Y2M2 353 aa9.89□□□□□ -0.83
CLMN-203ENST00000555336 CC2D2AQ9P2K1 1620 aa9.86□□□□□ -0.83
CLMN-203ENST00000555336 STAG3Q9UJ98 1225 aa9.85□□□□□ -0.83
CLMN-203ENST00000555336 PKD2Q13563 968 aa9.8□□□□□ -0.84
CLMN-203ENST00000555336 AKT1S1Q96B36 256 aa9.78□□□□□ -0.84
CLMN-203ENST00000555336 MYO15BQ96JP2 1530 aa9.77□□□□□ -0.84
CLMN-203ENST00000555336 SPOCK2Q92563 424 aa9.77□□□□□ -0.85
CLMN-203ENST00000555336 KLHL34Q8N239 644 aa9.76□□□□□ -0.85
CLMN-203ENST00000555336 DAXXQ9UER7 740 aaPredicted RBP9.76□□□□□ -0.85
CLMN-203ENST00000555336 EIF4G1Q04637 1599 aaKnown RBP9.73□□□□□ -0.85
CLMN-203ENST00000555336 PLCD3Q8N3E9 789 aa9.73□□□□□ -0.85
CLMN-203ENST00000555336 SHROOM4Q9ULL8 1493 aa9.72□□□□□ -0.85
CLMN-203ENST00000555336 PLCB2Q00722 1185 aa9.72□□□□□ -0.85
CLMN-203ENST00000555336 REM2Q8IYK8 340 aaPredicted RBP9.72□□□□□ -0.85
CLMN-203ENST00000555336 MIER1Q8N108 512 aa9.69□□□□□ -0.86
CLMN-203ENST00000555336 CHRDL2Q6WN34 429 aa9.66□□□□□ -0.86
CLMN-203ENST00000555336 ECM2O94769 699 aaPredicted RBP9.64□□□□□ -0.87
CLMN-203ENST00000555336 PITPNM1O00562 1244 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms