Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.88■■□□□ 1.09
RNF43Q68DV7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
RNF43Q68DV7 AC010141.2-201ENST00000452426 721 ntBASIC21.88■■□□□ 1.09
RNF43Q68DV7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF43Q68DV7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.88■■□□□ 1.09
RNF43Q68DV7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.88■■□□□ 1.09
RNF43Q68DV7 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF43Q68DV7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF43Q68DV7 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF43Q68DV7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF43Q68DV7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF43Q68DV7 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF43Q68DV7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF43Q68DV7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.87■■□□□ 1.09
RNF43Q68DV7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF43Q68DV7 AC010542.4-201ENST00000563151 1910 ntBASIC21.87■■□□□ 1.09
RNF43Q68DV7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF43Q68DV7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RNF43Q68DV7 AP001160.3-201ENST00000601484 763 ntBASIC21.87■■□□□ 1.09
RNF43Q68DV7 AC053503.5-201ENST00000601508 636 ntBASIC21.87■■□□□ 1.09
RNF43Q68DV7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.87■■□□□ 1.09
RNF43Q68DV7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.87■■□□□ 1.09
RNF43Q68DV7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF43Q68DV7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.87■■□□□ 1.09
RNF43Q68DV7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF43Q68DV7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RNF43Q68DV7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF43Q68DV7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RNF43Q68DV7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RNF43Q68DV7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF43Q68DV7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.86■■□□□ 1.09
RNF43Q68DV7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF43Q68DV7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF43Q68DV7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF43Q68DV7 GPX1P1-201ENST00000388829 606 ntBASIC21.86■■□□□ 1.09
RNF43Q68DV7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RNF43Q68DV7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.86■■□□□ 1.09
RNF43Q68DV7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF43Q68DV7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF43Q68DV7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.86■■□□□ 1.09
RNF43Q68DV7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RNF43Q68DV7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF43Q68DV7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.86■■□□□ 1.09
RNF43Q68DV7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF43Q68DV7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF43Q68DV7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.85■■□□□ 1.09
RNF43Q68DV7 AC005229.4-201ENST00000610085 2198 ntBASIC21.85■■□□□ 1.09
RNF43Q68DV7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
RNF43Q68DV7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.85■■□□□ 1.09
RNF43Q68DV7 MIR663A-201ENST00000385250 93 ntBASIC21.85■■□□□ 1.09
RNF43Q68DV7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.85■■□□□ 1.09
RNF43Q68DV7 TSPY20P-201ENST00000450910 630 ntBASIC21.85■■□□□ 1.09
RNF43Q68DV7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.85■■□□□ 1.09
RNF43Q68DV7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RNF43Q68DV7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.85■■□□□ 1.09
RNF43Q68DV7 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
RNF43Q68DV7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RNF43Q68DV7 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF43Q68DV7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
RNF43Q68DV7 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.85■■□□□ 1.09
RNF43Q68DV7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.84■■□□□ 1.09
RNF43Q68DV7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RNF43Q68DV7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF43Q68DV7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF43Q68DV7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.84■■□□□ 1.09
RNF43Q68DV7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RNF43Q68DV7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF43Q68DV7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF43Q68DV7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.84■■□□□ 1.09
RNF43Q68DV7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
RNF43Q68DV7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.84■■□□□ 1.09
RNF43Q68DV7 MFSD11-216ENST00000590393 1141 ntBASIC21.84■■□□□ 1.09
RNF43Q68DV7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RNF43Q68DV7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF43Q68DV7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF43Q68DV7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF43Q68DV7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
RNF43Q68DV7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.84■■□□□ 1.09
RNF43Q68DV7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF43Q68DV7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RNF43Q68DV7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RNF43Q68DV7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.83■■□□□ 1.09
RNF43Q68DV7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RNF43Q68DV7 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.83■■□□□ 1.09
RNF43Q68DV7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.83■■□□□ 1.09
RNF43Q68DV7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RNF43Q68DV7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
RNF43Q68DV7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RNF43Q68DV7 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.83■■□□□ 1.09
RNF43Q68DV7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.83■■□□□ 1.09
RNF43Q68DV7 KRT18P20-201ENST00000548986 1279 ntBASIC21.83■■□□□ 1.09
RNF43Q68DV7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RNF43Q68DV7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RNF43Q68DV7 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
RNF43Q68DV7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.83■■□□□ 1.08
RNF43Q68DV7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
RNF43Q68DV7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RNF43Q68DV7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RNF43Q68DV7 PKD1P6-201ENST00000343738 4769 ntBASIC21.83■■□□□ 1.08
RNF43Q68DV7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms