Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.7■□□□□ 0.74
LPCAT4Q643R3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LPCAT4Q643R3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LPCAT4Q643R3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.7■□□□□ 0.74
LPCAT4Q643R3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.7■□□□□ 0.74
LPCAT4Q643R3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LPCAT4Q643R3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
LPCAT4Q643R3 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.7■□□□□ 0.74
LPCAT4Q643R3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
LPCAT4Q643R3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LPCAT4Q643R3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.7■□□□□ 0.74
LPCAT4Q643R3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.7■□□□□ 0.74
LPCAT4Q643R3 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LPCAT4Q643R3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LPCAT4Q643R3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LPCAT4Q643R3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LPCAT4Q643R3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.7■□□□□ 0.74
LPCAT4Q643R3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LPCAT4Q643R3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LPCAT4Q643R3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.69■□□□□ 0.74
LPCAT4Q643R3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LPCAT4Q643R3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LPCAT4Q643R3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.69■□□□□ 0.74
LPCAT4Q643R3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LPCAT4Q643R3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LPCAT4Q643R3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.69■□□□□ 0.74
LPCAT4Q643R3 RARRES2P2-201ENST00000394842 485 ntBASIC19.69■□□□□ 0.74
LPCAT4Q643R3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
LPCAT4Q643R3 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.69■□□□□ 0.74
LPCAT4Q643R3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LPCAT4Q643R3 AC005703.6-201ENST00000623265 1329 ntBASIC19.69■□□□□ 0.74
LPCAT4Q643R3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LPCAT4Q643R3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LPCAT4Q643R3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.69■□□□□ 0.74
LPCAT4Q643R3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
LPCAT4Q643R3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LPCAT4Q643R3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
LPCAT4Q643R3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LPCAT4Q643R3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LPCAT4Q643R3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.68■□□□□ 0.74
LPCAT4Q643R3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.68■□□□□ 0.74
LPCAT4Q643R3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LPCAT4Q643R3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.68■□□□□ 0.74
LPCAT4Q643R3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LPCAT4Q643R3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.68■□□□□ 0.74
LPCAT4Q643R3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.68■□□□□ 0.74
LPCAT4Q643R3 AC007225.1-201ENST00000566331 1836 ntBASIC19.68■□□□□ 0.74
LPCAT4Q643R3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LPCAT4Q643R3 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.68■□□□□ 0.74
LPCAT4Q643R3 U85056.1-201ENST00000616429 682 ntBASIC19.68■□□□□ 0.74
LPCAT4Q643R3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LPCAT4Q643R3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LPCAT4Q643R3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LPCAT4Q643R3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LPCAT4Q643R3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LPCAT4Q643R3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LPCAT4Q643R3 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
LPCAT4Q643R3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LPCAT4Q643R3 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
LPCAT4Q643R3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LPCAT4Q643R3 AP000974.1-201ENST00000623909 2387 ntBASIC19.68■□□□□ 0.74
LPCAT4Q643R3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.67■□□□□ 0.74
LPCAT4Q643R3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LPCAT4Q643R3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LPCAT4Q643R3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LPCAT4Q643R3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LPCAT4Q643R3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LPCAT4Q643R3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LPCAT4Q643R3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LPCAT4Q643R3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
LPCAT4Q643R3 AC004408.2-201ENST00000623613 2777 ntBASIC19.67■□□□□ 0.74
LPCAT4Q643R3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LPCAT4Q643R3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
LPCAT4Q643R3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.67■□□□□ 0.74
LPCAT4Q643R3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LPCAT4Q643R3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LPCAT4Q643R3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
LPCAT4Q643R3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LPCAT4Q643R3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LPCAT4Q643R3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LPCAT4Q643R3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LPCAT4Q643R3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.67■□□□□ 0.74
LPCAT4Q643R3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LPCAT4Q643R3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
LPCAT4Q643R3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LPCAT4Q643R3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LPCAT4Q643R3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LPCAT4Q643R3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LPCAT4Q643R3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LPCAT4Q643R3 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LPCAT4Q643R3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
LPCAT4Q643R3 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LPCAT4Q643R3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.66■□□□□ 0.74
LPCAT4Q643R3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LPCAT4Q643R3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LPCAT4Q643R3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LPCAT4Q643R3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
LPCAT4Q643R3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LPCAT4Q643R3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LPCAT4Q643R3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms