Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC11.34□□□□□ -0.59
RNF213Q63HN8 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC11.34□□□□□ -0.59
RNF213Q63HN8 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC11.34□□□□□ -0.59
RNF213Q63HN8 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC11.34□□□□□ -0.59
RNF213Q63HN8 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
RNF213Q63HN8 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RNF213Q63HN8 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC11.34□□□□□ -0.59
RNF213Q63HN8 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RNF213Q63HN8 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC11.34□□□□□ -0.59
RNF213Q63HN8 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC11.34□□□□□ -0.59
RNF213Q63HN8 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC11.34□□□□□ -0.59
RNF213Q63HN8 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RNF213Q63HN8 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RNF213Q63HN8 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC11.34□□□□□ -0.59
RNF213Q63HN8 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC11.34□□□□□ -0.59
RNF213Q63HN8 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC11.34□□□□□ -0.59
RNF213Q63HN8 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
RNF213Q63HN8 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC11.33□□□□□ -0.59
RNF213Q63HN8 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC11.33□□□□□ -0.59
RNF213Q63HN8 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RNF213Q63HN8 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC11.33□□□□□ -0.6
RNF213Q63HN8 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC11.33□□□□□ -0.6
RNF213Q63HN8 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC11.33□□□□□ -0.6
RNF213Q63HN8 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC11.33□□□□□ -0.6
RNF213Q63HN8 FGF8-207ENST00000618991 856 ntTSL 3 BASIC11.33□□□□□ -0.6
RNF213Q63HN8 CR769767.2-201ENST00000622735 460 ntBASIC11.33□□□□□ -0.6
RNF213Q63HN8 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC11.33□□□□□ -0.6
RNF213Q63HN8 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RNF213Q63HN8 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
RNF213Q63HN8 CEBPA-AS1-201ENST00000592982 2198 ntBASIC11.33□□□□□ -0.6
RNF213Q63HN8 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RNF213Q63HN8 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
RNF213Q63HN8 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RNF213Q63HN8 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RNF213Q63HN8 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RNF213Q63HN8 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC11.33□□□□□ -0.6
RNF213Q63HN8 CFL1-212ENST00000531413 636 ntTSL 3 BASIC11.33□□□□□ -0.6
RNF213Q63HN8 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RNF213Q63HN8 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
RNF213Q63HN8 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC11.33□□□□□ -0.6
RNF213Q63HN8 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
RNF213Q63HN8 REXO1L10P-201ENST00000615707 1290 ntBASIC11.33□□□□□ -0.6
RNF213Q63HN8 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC11.33□□□□□ -0.6
RNF213Q63HN8 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RNF213Q63HN8 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
RNF213Q63HN8 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
RNF213Q63HN8 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
RNF213Q63HN8 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RNF213Q63HN8 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RNF213Q63HN8 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RNF213Q63HN8 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RNF213Q63HN8 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
RNF213Q63HN8 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
RNF213Q63HN8 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RNF213Q63HN8 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RNF213Q63HN8 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RNF213Q63HN8 FAM8A6P-201ENST00000407496 1135 ntBASIC11.32□□□□□ -0.6
RNF213Q63HN8 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC11.32□□□□□ -0.6
RNF213Q63HN8 AL034346.1-201ENST00000568244 1277 ntBASIC11.32□□□□□ -0.6
RNF213Q63HN8 AL671883.3-201ENST00000603274 991 ntBASIC11.32□□□□□ -0.6
RNF213Q63HN8 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RNF213Q63HN8 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RNF213Q63HN8 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RNF213Q63HN8 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RNF213Q63HN8 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
RNF213Q63HN8 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RNF213Q63HN8 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC11.32□□□□□ -0.6
RNF213Q63HN8 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RNF213Q63HN8 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC11.32□□□□□ -0.6
RNF213Q63HN8 CABP2-204ENST00000636477 941 ntTSL 5 BASIC11.32□□□□□ -0.6
RNF213Q63HN8 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RNF213Q63HN8 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC11.32□□□□□ -0.6
RNF213Q63HN8 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RNF213Q63HN8 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RNF213Q63HN8 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
RNF213Q63HN8 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
RNF213Q63HN8 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC11.32□□□□□ -0.6
RNF213Q63HN8 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC11.32□□□□□ -0.6
RNF213Q63HN8 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC11.32□□□□□ -0.6
RNF213Q63HN8 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RNF213Q63HN8 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC11.31□□□□□ -0.6
RNF213Q63HN8 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
RNF213Q63HN8 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
RNF213Q63HN8 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RNF213Q63HN8 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC11.31□□□□□ -0.6
RNF213Q63HN8 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC11.31□□□□□ -0.6
RNF213Q63HN8 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC11.31□□□□□ -0.6
RNF213Q63HN8 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC11.31□□□□□ -0.6
RNF213Q63HN8 AP000550.4-202ENST00000639755 178 ntBASIC11.31□□□□□ -0.6
RNF213Q63HN8 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC11.31□□□□□ -0.6
RNF213Q63HN8 UNC93B2-201ENST00000285383 730 ntBASIC11.31□□□□□ -0.6
RNF213Q63HN8 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC11.31□□□□□ -0.6
RNF213Q63HN8 AL591742.1-201ENST00000604433 565 ntBASIC11.31□□□□□ -0.6
RNF213Q63HN8 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC11.31□□□□□ -0.6
RNF213Q63HN8 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
RNF213Q63HN8 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC11.31□□□□□ -0.6
RNF213Q63HN8 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
RNF213Q63HN8 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC11.31□□□□□ -0.6
RNF213Q63HN8 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RNF213Q63HN8 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms