Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRIF1Q5T3J3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.72■□□□□ 0.75
LRIF1Q5T3J3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LRIF1Q5T3J3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.72■□□□□ 0.75
LRIF1Q5T3J3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRIF1Q5T3J3 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
LRIF1Q5T3J3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
LRIF1Q5T3J3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.71■□□□□ 0.75
LRIF1Q5T3J3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRIF1Q5T3J3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRIF1Q5T3J3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRIF1Q5T3J3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.71■□□□□ 0.75
LRIF1Q5T3J3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRIF1Q5T3J3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.71■□□□□ 0.75
LRIF1Q5T3J3 AC024257.2-201ENST00000549699 147 ntBASIC19.71■□□□□ 0.75
LRIF1Q5T3J3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
LRIF1Q5T3J3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.71■□□□□ 0.75
LRIF1Q5T3J3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRIF1Q5T3J3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRIF1Q5T3J3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.71■□□□□ 0.75
LRIF1Q5T3J3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRIF1Q5T3J3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRIF1Q5T3J3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.7■□□□□ 0.74
LRIF1Q5T3J3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.7■□□□□ 0.74
LRIF1Q5T3J3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
LRIF1Q5T3J3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRIF1Q5T3J3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
LRIF1Q5T3J3 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.7■□□□□ 0.74
LRIF1Q5T3J3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.7■□□□□ 0.74
LRIF1Q5T3J3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
LRIF1Q5T3J3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRIF1Q5T3J3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.7■□□□□ 0.74
LRIF1Q5T3J3 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.7■□□□□ 0.74
LRIF1Q5T3J3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRIF1Q5T3J3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.7■□□□□ 0.74
LRIF1Q5T3J3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRIF1Q5T3J3 AC027702.1-201ENST00000563810 1770 ntBASIC19.7■□□□□ 0.74
LRIF1Q5T3J3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRIF1Q5T3J3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRIF1Q5T3J3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
LRIF1Q5T3J3 AC007225.1-201ENST00000566331 1836 ntBASIC19.69■□□□□ 0.74
LRIF1Q5T3J3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRIF1Q5T3J3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRIF1Q5T3J3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRIF1Q5T3J3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRIF1Q5T3J3 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRIF1Q5T3J3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.69■□□□□ 0.74
LRIF1Q5T3J3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.69■□□□□ 0.74
LRIF1Q5T3J3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LRIF1Q5T3J3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.69■□□□□ 0.74
LRIF1Q5T3J3 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.69■□□□□ 0.74
LRIF1Q5T3J3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.69■□□□□ 0.74
LRIF1Q5T3J3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
LRIF1Q5T3J3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LRIF1Q5T3J3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.69■□□□□ 0.74
LRIF1Q5T3J3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.69■□□□□ 0.74
LRIF1Q5T3J3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRIF1Q5T3J3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
LRIF1Q5T3J3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.68■□□□□ 0.74
LRIF1Q5T3J3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.68■□□□□ 0.74
LRIF1Q5T3J3 BX005040.4-201ENST00000637145 1518 ntBASIC19.68■□□□□ 0.74
LRIF1Q5T3J3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRIF1Q5T3J3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.68■□□□□ 0.74
LRIF1Q5T3J3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.68■□□□□ 0.74
LRIF1Q5T3J3 AL136162.1-201ENST00000607711 1078 ntBASIC19.68■□□□□ 0.74
LRIF1Q5T3J3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.68■□□□□ 0.74
LRIF1Q5T3J3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRIF1Q5T3J3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRIF1Q5T3J3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.68■□□□□ 0.74
LRIF1Q5T3J3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRIF1Q5T3J3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRIF1Q5T3J3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.68■□□□□ 0.74
LRIF1Q5T3J3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
LRIF1Q5T3J3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.68■□□□□ 0.74
LRIF1Q5T3J3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRIF1Q5T3J3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRIF1Q5T3J3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.67■□□□□ 0.74
LRIF1Q5T3J3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LRIF1Q5T3J3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
LRIF1Q5T3J3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRIF1Q5T3J3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRIF1Q5T3J3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.67■□□□□ 0.74
LRIF1Q5T3J3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
LRIF1Q5T3J3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
LRIF1Q5T3J3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRIF1Q5T3J3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.67■□□□□ 0.74
LRIF1Q5T3J3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.67■□□□□ 0.74
LRIF1Q5T3J3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRIF1Q5T3J3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.67■□□□□ 0.74
LRIF1Q5T3J3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.67■□□□□ 0.74
LRIF1Q5T3J3 AC105233.4-201ENST00000642045 216 ntBASIC19.67■□□□□ 0.74
LRIF1Q5T3J3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
LRIF1Q5T3J3 AC135279.3-201ENST00000610945 1311 ntBASIC19.67■□□□□ 0.74
LRIF1Q5T3J3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
LRIF1Q5T3J3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRIF1Q5T3J3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
LRIF1Q5T3J3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRIF1Q5T3J3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRIF1Q5T3J3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LRIF1Q5T3J3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms