Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC58Q4VC31 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC58Q4VC31 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC58Q4VC31 AP004607.7-201ENST00000527152 1677 ntBASIC18.61■□□□□ 0.57
CCDC58Q4VC31 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC58Q4VC31 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
CCDC58Q4VC31 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC58Q4VC31 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CCDC58Q4VC31 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC58Q4VC31 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC58Q4VC31 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC58Q4VC31 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC58Q4VC31 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC58Q4VC31 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC58Q4VC31 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC58Q4VC31 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC58Q4VC31 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC58Q4VC31 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC58Q4VC31 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC58Q4VC31 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC58Q4VC31 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
CCDC58Q4VC31 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC58Q4VC31 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC58Q4VC31 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC58Q4VC31 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC58Q4VC31 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC58Q4VC31 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC58Q4VC31 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC58Q4VC31 UNC93B8-201ENST00000511903 705 ntBASIC18.6■□□□□ 0.57
CCDC58Q4VC31 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.6■□□□□ 0.57
CCDC58Q4VC31 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC58Q4VC31 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC58Q4VC31 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CCDC58Q4VC31 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC58Q4VC31 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC58Q4VC31 AL158211.5-201ENST00000623583 2518 ntBASIC18.6■□□□□ 0.57
CCDC58Q4VC31 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC58Q4VC31 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC58Q4VC31 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC58Q4VC31 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CCDC58Q4VC31 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC58Q4VC31 GABARAPL3-202ENST00000624044 1851 ntBASIC18.59■□□□□ 0.57
CCDC58Q4VC31 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC58Q4VC31 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CCDC58Q4VC31 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC58Q4VC31 AC009299.2-201ENST00000482477 511 ntBASIC18.59■□□□□ 0.57
CCDC58Q4VC31 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CCDC58Q4VC31 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC58Q4VC31 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC58Q4VC31 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC58Q4VC31 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CCDC58Q4VC31 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC58Q4VC31 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC58Q4VC31 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC58Q4VC31 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC58Q4VC31 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC58Q4VC31 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC58Q4VC31 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CCDC58Q4VC31 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC58Q4VC31 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.58■□□□□ 0.57
CCDC58Q4VC31 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC58Q4VC31 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.58■□□□□ 0.57
CCDC58Q4VC31 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC58Q4VC31 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC58Q4VC31 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC58Q4VC31 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC58Q4VC31 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.58■□□□□ 0.56
CCDC58Q4VC31 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC58Q4VC31 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CCDC58Q4VC31 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
CCDC58Q4VC31 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
CCDC58Q4VC31 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC58Q4VC31 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC58Q4VC31 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC58Q4VC31 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC58Q4VC31 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CCDC58Q4VC31 AC006128.1-201ENST00000624704 1661 ntBASIC18.57■□□□□ 0.56
CCDC58Q4VC31 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC58Q4VC31 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC58Q4VC31 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC58Q4VC31 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC58Q4VC31 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CCDC58Q4VC31 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC58Q4VC31 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC58Q4VC31 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC58Q4VC31 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CCDC58Q4VC31 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC58Q4VC31 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
CCDC58Q4VC31 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CCDC58Q4VC31 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC58Q4VC31 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC58Q4VC31 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC58Q4VC31 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC58Q4VC31 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC58Q4VC31 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC58Q4VC31 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC58Q4VC31 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC58Q4VC31 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC58Q4VC31 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC58Q4VC31 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms