Protein–RNA interactions for Protein: Q15012

LAPTM4A, Lysosomal-associated transmembrane protein 4A, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4AQ15012 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
LAPTM4AQ15012 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.41■□□□□ 0.7
LAPTM4AQ15012 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.41■□□□□ 0.7
LAPTM4AQ15012 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LAPTM4AQ15012 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.41■□□□□ 0.7
LAPTM4AQ15012 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
LAPTM4AQ15012 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
LAPTM4AQ15012 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LAPTM4AQ15012 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.41■□□□□ 0.7
LAPTM4AQ15012 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.41■□□□□ 0.7
LAPTM4AQ15012 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LAPTM4AQ15012 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
LAPTM4AQ15012 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LAPTM4AQ15012 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LAPTM4AQ15012 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
LAPTM4AQ15012 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LAPTM4AQ15012 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LAPTM4AQ15012 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.41■□□□□ 0.7
LAPTM4AQ15012 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.41■□□□□ 0.7
LAPTM4AQ15012 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.41■□□□□ 0.7
LAPTM4AQ15012 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
LAPTM4AQ15012 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
LAPTM4AQ15012 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.4■□□□□ 0.7
LAPTM4AQ15012 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
LAPTM4AQ15012 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
LAPTM4AQ15012 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
LAPTM4AQ15012 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LAPTM4AQ15012 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LAPTM4AQ15012 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
LAPTM4AQ15012 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LAPTM4AQ15012 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LAPTM4AQ15012 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.4■□□□□ 0.7
LAPTM4AQ15012 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
LAPTM4AQ15012 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
LAPTM4AQ15012 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
LAPTM4AQ15012 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
LAPTM4AQ15012 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LAPTM4AQ15012 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LAPTM4AQ15012 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LAPTM4AQ15012 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LAPTM4AQ15012 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.39■□□□□ 0.7
LAPTM4AQ15012 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
LAPTM4AQ15012 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
LAPTM4AQ15012 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
LAPTM4AQ15012 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
LAPTM4AQ15012 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.39■□□□□ 0.7
LAPTM4AQ15012 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.39■□□□□ 0.7
LAPTM4AQ15012 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LAPTM4AQ15012 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
LAPTM4AQ15012 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LAPTM4AQ15012 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LAPTM4AQ15012 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LAPTM4AQ15012 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LAPTM4AQ15012 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.39■□□□□ 0.69
LAPTM4AQ15012 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.39■□□□□ 0.69
LAPTM4AQ15012 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
LAPTM4AQ15012 AC136469.2-201ENST00000623944 1028 ntBASIC19.39■□□□□ 0.69
LAPTM4AQ15012 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.39■□□□□ 0.69
LAPTM4AQ15012 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
LAPTM4AQ15012 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.39■□□□□ 0.69
LAPTM4AQ15012 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LAPTM4AQ15012 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
LAPTM4AQ15012 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LAPTM4AQ15012 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LAPTM4AQ15012 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LAPTM4AQ15012 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LAPTM4AQ15012 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.39■□□□□ 0.69
LAPTM4AQ15012 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LAPTM4AQ15012 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
LAPTM4AQ15012 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LAPTM4AQ15012 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
LAPTM4AQ15012 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LAPTM4AQ15012 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LAPTM4AQ15012 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LAPTM4AQ15012 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LAPTM4AQ15012 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
LAPTM4AQ15012 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LAPTM4AQ15012 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
LAPTM4AQ15012 AL136116.3-201ENST00000402907 1138 ntBASIC19.38■□□□□ 0.69
LAPTM4AQ15012 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.38■□□□□ 0.69
LAPTM4AQ15012 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.38■□□□□ 0.69
LAPTM4AQ15012 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LAPTM4AQ15012 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.38■□□□□ 0.69
LAPTM4AQ15012 AL034346.1-201ENST00000568244 1277 ntBASIC19.38■□□□□ 0.69
LAPTM4AQ15012 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LAPTM4AQ15012 AC011298.3-201ENST00000615796 283 ntBASIC19.38■□□□□ 0.69
LAPTM4AQ15012 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.38■□□□□ 0.69
LAPTM4AQ15012 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LAPTM4AQ15012 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.38■□□□□ 0.69
LAPTM4AQ15012 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LAPTM4AQ15012 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LAPTM4AQ15012 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
LAPTM4AQ15012 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LAPTM4AQ15012 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LAPTM4AQ15012 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LAPTM4AQ15012 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LAPTM4AQ15012 SLC47A1P1-202ENST00000449666 945 ntBASIC19.37■□□□□ 0.69
LAPTM4AQ15012 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.37■□□□□ 0.69
LAPTM4AQ15012 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LAPTM4AQ15012 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms