Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
H3F3AP84243 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
H3F3AP84243 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.72■□□□□ 0.59
H3F3AP84243 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.72■□□□□ 0.59
H3F3AP84243 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
H3F3AP84243 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.72■□□□□ 0.59
H3F3AP84243 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.72■□□□□ 0.59
H3F3AP84243 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
H3F3AP84243 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.72■□□□□ 0.59
H3F3AP84243 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
H3F3AP84243 AC022517.1-201ENST00000592429 346 ntBASIC18.72■□□□□ 0.59
H3F3AP84243 AC120498.10-201ENST00000621827 505 ntBASIC18.72■□□□□ 0.59
H3F3AP84243 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
H3F3AP84243 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
H3F3AP84243 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
H3F3AP84243 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
H3F3AP84243 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
H3F3AP84243 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.71■□□□□ 0.59
H3F3AP84243 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
H3F3AP84243 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
H3F3AP84243 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
H3F3AP84243 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
H3F3AP84243 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
H3F3AP84243 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.71■□□□□ 0.59
H3F3AP84243 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.71■□□□□ 0.59
H3F3AP84243 AC006015.1-201ENST00000429970 570 ntBASIC18.71■□□□□ 0.59
H3F3AP84243 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
H3F3AP84243 AL024507.2-201ENST00000606070 2574 ntBASIC18.71■□□□□ 0.59
H3F3AP84243 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
H3F3AP84243 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
H3F3AP84243 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
H3F3AP84243 KRT18P11-201ENST00000435214 1283 ntBASIC18.7■□□□□ 0.58
H3F3AP84243 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.7■□□□□ 0.58
H3F3AP84243 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.7■□□□□ 0.58
H3F3AP84243 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.7■□□□□ 0.58
H3F3AP84243 AC007375.3-201ENST00000600936 2314 ntBASIC18.7■□□□□ 0.58
H3F3AP84243 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
H3F3AP84243 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.69■□□□□ 0.58
H3F3AP84243 PKD1P6-201ENST00000343738 4769 ntBASIC18.69■□□□□ 0.58
H3F3AP84243 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
H3F3AP84243 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.69■□□□□ 0.58
H3F3AP84243 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.69■□□□□ 0.58
H3F3AP84243 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.69■□□□□ 0.58
H3F3AP84243 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.69■□□□□ 0.58
H3F3AP84243 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
H3F3AP84243 AC137761.2-201ENST00000561729 223 ntBASIC18.69■□□□□ 0.58
H3F3AP84243 AC145350.3-201ENST00000569033 163 ntBASIC18.69■□□□□ 0.58
H3F3AP84243 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.69■□□□□ 0.58
H3F3AP84243 UBE2DNL-204ENST00000602536 740 ntBASIC18.69■□□□□ 0.58
H3F3AP84243 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.69■□□□□ 0.58
H3F3AP84243 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
H3F3AP84243 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.68■□□□□ 0.58
H3F3AP84243 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
H3F3AP84243 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
H3F3AP84243 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
H3F3AP84243 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.68■□□□□ 0.58
H3F3AP84243 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.68■□□□□ 0.58
H3F3AP84243 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.68■□□□□ 0.58
H3F3AP84243 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
H3F3AP84243 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.68■□□□□ 0.58
H3F3AP84243 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
H3F3AP84243 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
H3F3AP84243 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
H3F3AP84243 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
H3F3AP84243 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
H3F3AP84243 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.68■□□□□ 0.58
H3F3AP84243 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
H3F3AP84243 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
H3F3AP84243 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
H3F3AP84243 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
H3F3AP84243 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
H3F3AP84243 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.67■□□□□ 0.58
H3F3AP84243 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
H3F3AP84243 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
H3F3AP84243 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
H3F3AP84243 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
H3F3AP84243 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
H3F3AP84243 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
H3F3AP84243 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.67■□□□□ 0.58
H3F3AP84243 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.67■□□□□ 0.58
H3F3AP84243 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.67■□□□□ 0.58
H3F3AP84243 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.67■□□□□ 0.58
H3F3AP84243 MYCNOS-205ENST00000641950 531 ntBASIC18.67■□□□□ 0.58
H3F3AP84243 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
H3F3AP84243 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
H3F3AP84243 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
H3F3AP84243 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
H3F3AP84243 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
H3F3AP84243 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.67■□□□□ 0.58
H3F3AP84243 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
H3F3AP84243 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
H3F3AP84243 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
H3F3AP84243 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
H3F3AP84243 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
H3F3AP84243 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.66■□□□□ 0.58
H3F3AP84243 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
H3F3AP84243 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.66■□□□□ 0.58
H3F3AP84243 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
H3F3AP84243 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.66■□□□□ 0.58
H3F3AP84243 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms