Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
EIF4A1P60842 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
EIF4A1P60842 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC26.9■■□□□ 1.9
EIF4A1P60842 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
EIF4A1P60842 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC26.9■■□□□ 1.9
EIF4A1P60842 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC26.9■■□□□ 1.9
EIF4A1P60842 FAM21FP-204ENST00000608637 956 ntBASIC26.9■■□□□ 1.9
EIF4A1P60842 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
EIF4A1P60842 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC26.89■■□□□ 1.9
EIF4A1P60842 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
EIF4A1P60842 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
EIF4A1P60842 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
EIF4A1P60842 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC26.89■■□□□ 1.9
EIF4A1P60842 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
EIF4A1P60842 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
EIF4A1P60842 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC26.89■■□□□ 1.89
EIF4A1P60842 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.89
EIF4A1P60842 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
EIF4A1P60842 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
EIF4A1P60842 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
EIF4A1P60842 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
EIF4A1P60842 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
EIF4A1P60842 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
EIF4A1P60842 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
EIF4A1P60842 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC26.88■■□□□ 1.89
EIF4A1P60842 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
EIF4A1P60842 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
EIF4A1P60842 AC133561.1-201ENST00000568600 2415 ntBASIC26.88■■□□□ 1.89
EIF4A1P60842 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
EIF4A1P60842 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC26.87■■□□□ 1.89
EIF4A1P60842 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC26.87■■□□□ 1.89
EIF4A1P60842 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
EIF4A1P60842 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
EIF4A1P60842 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC26.87■■□□□ 1.89
EIF4A1P60842 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
EIF4A1P60842 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC26.87■■□□□ 1.89
EIF4A1P60842 CASP6-205ENST00000505486 538 ntTSL 4 BASIC26.87■■□□□ 1.89
EIF4A1P60842 MYC-209ENST00000641252 345 ntBASIC26.87■■□□□ 1.89
EIF4A1P60842 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
EIF4A1P60842 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
EIF4A1P60842 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
EIF4A1P60842 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
EIF4A1P60842 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
EIF4A1P60842 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
EIF4A1P60842 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
EIF4A1P60842 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC26.86■■□□□ 1.89
EIF4A1P60842 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC26.86■■□□□ 1.89
EIF4A1P60842 ISCU-212ENST00000547005 795 ntTSL 3 BASIC26.86■■□□□ 1.89
EIF4A1P60842 MIR4651-201ENST00000582622 73 ntBASIC26.86■■□□□ 1.89
EIF4A1P60842 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
EIF4A1P60842 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
EIF4A1P60842 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
EIF4A1P60842 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
EIF4A1P60842 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
EIF4A1P60842 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
EIF4A1P60842 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC26.85■■□□□ 1.89
EIF4A1P60842 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
EIF4A1P60842 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC26.85■■□□□ 1.89
EIF4A1P60842 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
EIF4A1P60842 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
EIF4A1P60842 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
EIF4A1P60842 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC26.85■■□□□ 1.89
EIF4A1P60842 TSPY20P-201ENST00000450910 630 ntBASIC26.85■■□□□ 1.89
EIF4A1P60842 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
EIF4A1P60842 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
EIF4A1P60842 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC26.85■■□□□ 1.89
EIF4A1P60842 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
EIF4A1P60842 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
EIF4A1P60842 AL117328.2-201ENST00000624617 1940 ntBASIC26.84■■□□□ 1.89
EIF4A1P60842 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC26.84■■□□□ 1.89
EIF4A1P60842 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
EIF4A1P60842 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
EIF4A1P60842 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC26.84■■□□□ 1.89
EIF4A1P60842 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
EIF4A1P60842 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
EIF4A1P60842 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
EIF4A1P60842 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC26.84■■□□□ 1.89
EIF4A1P60842 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
EIF4A1P60842 AC083880.1-201ENST00000608266 535 ntBASIC26.84■■□□□ 1.89
EIF4A1P60842 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC26.84■■□□□ 1.89
EIF4A1P60842 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
EIF4A1P60842 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
EIF4A1P60842 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
EIF4A1P60842 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
EIF4A1P60842 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
EIF4A1P60842 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
EIF4A1P60842 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
EIF4A1P60842 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
EIF4A1P60842 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
EIF4A1P60842 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
EIF4A1P60842 AC012676.1-201ENST00000574705 1949 ntBASIC26.83■■□□□ 1.89
EIF4A1P60842 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC26.83■■□□□ 1.89
EIF4A1P60842 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
EIF4A1P60842 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC26.83■■□□□ 1.89
EIF4A1P60842 AL355472.2-201ENST00000422958 438 ntBASIC26.83■■□□□ 1.89
EIF4A1P60842 PTPA-214ENST00000423100 988 ntTSL 2 BASIC26.83■■□□□ 1.89
EIF4A1P60842 VMO1-204ENST00000441199 741 ntTSL 2 BASIC26.83■■□□□ 1.89
EIF4A1P60842 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
EIF4A1P60842 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC26.83■■□□□ 1.89
EIF4A1P60842 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC26.83■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms