Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.66■□□□□ 0.58
CLDN17P56750 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CLDN17P56750 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.66■□□□□ 0.58
CLDN17P56750 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN17P56750 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN17P56750 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CLDN17P56750 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN17P56750 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN17P56750 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.65■□□□□ 0.58
CLDN17P56750 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN17P56750 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN17P56750 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.65■□□□□ 0.58
CLDN17P56750 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CLDN17P56750 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CLDN17P56750 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.65■□□□□ 0.58
CLDN17P56750 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN17P56750 KRT18P61-201ENST00000585825 1298 ntBASIC18.65■□□□□ 0.58
CLDN17P56750 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN17P56750 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN17P56750 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CLDN17P56750 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CLDN17P56750 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.65■□□□□ 0.58
CLDN17P56750 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN17P56750 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN17P56750 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CLDN17P56750 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN17P56750 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN17P56750 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
CLDN17P56750 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CLDN17P56750 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
CLDN17P56750 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN17P56750 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN17P56750 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN17P56750 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.64■□□□□ 0.57
CLDN17P56750 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN17P56750 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.64■□□□□ 0.57
CLDN17P56750 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.64■□□□□ 0.57
CLDN17P56750 AC120498.10-201ENST00000621827 505 ntBASIC18.64■□□□□ 0.57
CLDN17P56750 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN17P56750 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN17P56750 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN17P56750 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN17P56750 AC005229.4-201ENST00000610085 2198 ntBASIC18.64■□□□□ 0.57
CLDN17P56750 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN17P56750 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN17P56750 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN17P56750 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN17P56750 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN17P56750 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.63■□□□□ 0.57
CLDN17P56750 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CLDN17P56750 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.63■□□□□ 0.57
CLDN17P56750 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
CLDN17P56750 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
CLDN17P56750 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN17P56750 KRT18P5-201ENST00000436075 1291 ntBASIC18.63■□□□□ 0.57
CLDN17P56750 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN17P56750 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN17P56750 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.63■□□□□ 0.57
CLDN17P56750 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN17P56750 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN17P56750 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN17P56750 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN17P56750 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CLDN17P56750 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CLDN17P56750 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN17P56750 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.62■□□□□ 0.57
CLDN17P56750 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN17P56750 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN17P56750 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN17P56750 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN17P56750 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN17P56750 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.62■□□□□ 0.57
CLDN17P56750 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.62■□□□□ 0.57
CLDN17P56750 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.62■□□□□ 0.57
CLDN17P56750 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.62■□□□□ 0.57
CLDN17P56750 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN17P56750 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.62■□□□□ 0.57
CLDN17P56750 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN17P56750 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN17P56750 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.61■□□□□ 0.57
CLDN17P56750 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.61■□□□□ 0.57
CLDN17P56750 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.61■□□□□ 0.57
CLDN17P56750 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN17P56750 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN17P56750 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.61■□□□□ 0.57
CLDN17P56750 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN17P56750 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN17P56750 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.61■□□□□ 0.57
CLDN17P56750 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN17P56750 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.61■□□□□ 0.57
CLDN17P56750 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.61■□□□□ 0.57
CLDN17P56750 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.61■□□□□ 0.57
CLDN17P56750 SLC7A5P2-201ENST00000553010 536 ntBASIC18.61■□□□□ 0.57
CLDN17P56750 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CLDN17P56750 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN17P56750 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN17P56750 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN17P56750 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN17P56750 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN17P56750 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms