Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PMS2P54278 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PMS2P54278 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
PMS2P54278 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
PMS2P54278 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PMS2P54278 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PMS2P54278 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
PMS2P54278 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PMS2P54278 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.52■■□□□ 1.04
PMS2P54278 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PMS2P54278 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PMS2P54278 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.52■■□□□ 1.04
PMS2P54278 AL391422.3-201ENST00000603791 2761 ntBASIC21.52■■□□□ 1.04
PMS2P54278 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.52■■□□□ 1.04
PMS2P54278 AC024257.2-201ENST00000549699 147 ntBASIC21.52■■□□□ 1.04
PMS2P54278 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.52■■□□□ 1.04
PMS2P54278 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
PMS2P54278 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.52■■□□□ 1.04
PMS2P54278 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.52■■□□□ 1.04
PMS2P54278 AP004607.7-201ENST00000527152 1677 ntBASIC21.52■■□□□ 1.04
PMS2P54278 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PMS2P54278 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.52■■□□□ 1.04
PMS2P54278 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PMS2P54278 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
PMS2P54278 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PMS2P54278 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
PMS2P54278 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PMS2P54278 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.51■■□□□ 1.03
PMS2P54278 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.51■■□□□ 1.03
PMS2P54278 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PMS2P54278 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.51■■□□□ 1.03
PMS2P54278 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PMS2P54278 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
PMS2P54278 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.51■■□□□ 1.03
PMS2P54278 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.51■■□□□ 1.03
PMS2P54278 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PMS2P54278 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PMS2P54278 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.51■■□□□ 1.03
PMS2P54278 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.51■■□□□ 1.03
PMS2P54278 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PMS2P54278 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PMS2P54278 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PMS2P54278 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
PMS2P54278 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PMS2P54278 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PMS2P54278 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PMS2P54278 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PMS2P54278 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PMS2P54278 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PMS2P54278 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.5■■□□□ 1.03
PMS2P54278 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.5■■□□□ 1.03
PMS2P54278 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PMS2P54278 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.5■■□□□ 1.03
PMS2P54278 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.5■■□□□ 1.03
PMS2P54278 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
PMS2P54278 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PMS2P54278 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
PMS2P54278 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.5■■□□□ 1.03
PMS2P54278 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PMS2P54278 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.5■■□□□ 1.03
PMS2P54278 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
PMS2P54278 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PMS2P54278 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
PMS2P54278 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PMS2P54278 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
PMS2P54278 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PMS2P54278 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
PMS2P54278 AC026271.2-201ENST00000428091 497 ntBASIC21.49■■□□□ 1.03
PMS2P54278 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.49■■□□□ 1.03
PMS2P54278 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.49■■□□□ 1.03
PMS2P54278 AC099791.2-201ENST00000605725 427 ntBASIC21.49■■□□□ 1.03
PMS2P54278 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.49■■□□□ 1.03
PMS2P54278 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PMS2P54278 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
PMS2P54278 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PMS2P54278 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PMS2P54278 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PMS2P54278 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PMS2P54278 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PMS2P54278 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PMS2P54278 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PMS2P54278 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.49■■□□□ 1.03
PMS2P54278 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PMS2P54278 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.48■■□□□ 1.03
PMS2P54278 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PMS2P54278 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PMS2P54278 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PMS2P54278 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.48■■□□□ 1.03
PMS2P54278 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PMS2P54278 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PMS2P54278 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
PMS2P54278 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PMS2P54278 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PMS2P54278 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PMS2P54278 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
PMS2P54278 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.48■■□□□ 1.03
PMS2P54278 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PMS2P54278 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
PMS2P54278 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
PMS2P54278 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms