Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 AC016575.1-201ENST00000607026 382 ntBASIC16.81■□□□□ 0.28
RAB5CP51148 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB5CP51148 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB5CP51148 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB5CP51148 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB5CP51148 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB5CP51148 AC090340.1-201ENST00000620778 4980 ntBASIC16.81■□□□□ 0.28
RAB5CP51148 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
RAB5CP51148 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RAB5CP51148 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RAB5CP51148 AC020907.5-201ENST00000624372 1936 ntBASIC16.8■□□□□ 0.28
RAB5CP51148 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB5CP51148 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB5CP51148 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RAB5CP51148 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB5CP51148 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RAB5CP51148 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC16.8■□□□□ 0.28
RAB5CP51148 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB5CP51148 AF131216.4-201ENST00000638924 1588 ntBASIC16.8■□□□□ 0.28
RAB5CP51148 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RAB5CP51148 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB5CP51148 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RAB5CP51148 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RAB5CP51148 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RAB5CP51148 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB5CP51148 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB5CP51148 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB5CP51148 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB5CP51148 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB5CP51148 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB5CP51148 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB5CP51148 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB5CP51148 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB5CP51148 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RAB5CP51148 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB5CP51148 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
RAB5CP51148 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC16.79■□□□□ 0.28
RAB5CP51148 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC16.79■□□□□ 0.28
RAB5CP51148 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB5CP51148 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB5CP51148 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RAB5CP51148 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RAB5CP51148 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB5CP51148 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB5CP51148 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB5CP51148 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB5CP51148 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC16.78■□□□□ 0.28
RAB5CP51148 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB5CP51148 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.78■□□□□ 0.28
RAB5CP51148 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB5CP51148 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
RAB5CP51148 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB5CP51148 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB5CP51148 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB5CP51148 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB5CP51148 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC16.78■□□□□ 0.28
RAB5CP51148 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB5CP51148 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB5CP51148 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB5CP51148 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB5CP51148 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RAB5CP51148 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB5CP51148 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.78■□□□□ 0.28
RAB5CP51148 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RAB5CP51148 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB5CP51148 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB5CP51148 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB5CP51148 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB5CP51148 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.77■□□□□ 0.28
RAB5CP51148 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
RAB5CP51148 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB5CP51148 AC027702.1-201ENST00000563810 1770 ntBASIC16.77■□□□□ 0.28
RAB5CP51148 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
RAB5CP51148 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
RAB5CP51148 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB5CP51148 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB5CP51148 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB5CP51148 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC16.77■□□□□ 0.28
RAB5CP51148 MIR6765-201ENST00000614092 87 ntBASIC16.77■□□□□ 0.28
RAB5CP51148 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RAB5CP51148 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB5CP51148 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.77■□□□□ 0.28
RAB5CP51148 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.77■□□□□ 0.28
RAB5CP51148 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB5CP51148 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
RAB5CP51148 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
RAB5CP51148 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB5CP51148 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RAB5CP51148 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB5CP51148 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.77■□□□□ 0.27
RAB5CP51148 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB5CP51148 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB5CP51148 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.77■□□□□ 0.27
RAB5CP51148 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB5CP51148 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB5CP51148 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB5CP51148 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB5CP51148 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB5CP51148 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.76■□□□□ 0.27
RAB5CP51148 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms