Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
HLA-DPA1P20036 AL049796.1-201ENST00000565336 1766 ntBASIC21.1■□□□□ 0.97
HLA-DPA1P20036 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-DPA1P20036 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-DPA1P20036 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-DPA1P20036 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-DPA1P20036 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-DPA1P20036 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.1■□□□□ 0.97
HLA-DPA1P20036 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
HLA-DPA1P20036 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-DPA1P20036 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.1■□□□□ 0.97
HLA-DPA1P20036 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-DPA1P20036 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.1■□□□□ 0.97
HLA-DPA1P20036 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-DPA1P20036 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.1■□□□□ 0.97
HLA-DPA1P20036 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-DPA1P20036 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-DPA1P20036 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
HLA-DPA1P20036 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-DPA1P20036 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DPA1P20036 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DPA1P20036 AF106564.1-201ENST00000607058 2553 ntBASIC21.09■□□□□ 0.97
HLA-DPA1P20036 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DPA1P20036 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.09■□□□□ 0.97
HLA-DPA1P20036 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DPA1P20036 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DPA1P20036 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
HLA-DPA1P20036 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
HLA-DPA1P20036 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DPA1P20036 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.09■□□□□ 0.97
HLA-DPA1P20036 KRT19P1-201ENST00000405746 1186 ntBASIC21.09■□□□□ 0.97
HLA-DPA1P20036 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
HLA-DPA1P20036 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.09■□□□□ 0.97
HLA-DPA1P20036 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
HLA-DPA1P20036 MIR5787-201ENST00000611784 55 ntBASIC21.09■□□□□ 0.97
HLA-DPA1P20036 AC120498.10-201ENST00000621827 505 ntBASIC21.09■□□□□ 0.97
HLA-DPA1P20036 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
HLA-DPA1P20036 AL137060.1-201ENST00000618151 2648 ntBASIC21.09■□□□□ 0.97
HLA-DPA1P20036 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.09■□□□□ 0.97
HLA-DPA1P20036 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
HLA-DPA1P20036 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DPA1P20036 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
HLA-DPA1P20036 AC005229.4-201ENST00000610085 2198 ntBASIC21.09■□□□□ 0.97
HLA-DPA1P20036 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.09■□□□□ 0.97
HLA-DPA1P20036 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HLA-DPA1P20036 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HLA-DPA1P20036 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
HLA-DPA1P20036 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
HLA-DPA1P20036 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
HLA-DPA1P20036 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.08■□□□□ 0.97
HLA-DPA1P20036 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.08■□□□□ 0.97
HLA-DPA1P20036 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HLA-DPA1P20036 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HLA-DPA1P20036 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HLA-DPA1P20036 KRT16P2-201ENST00000414673 1423 ntBASIC21.08■□□□□ 0.97
HLA-DPA1P20036 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.08■□□□□ 0.97
HLA-DPA1P20036 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.08■□□□□ 0.97
HLA-DPA1P20036 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.08■□□□□ 0.97
HLA-DPA1P20036 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HLA-DPA1P20036 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HLA-DPA1P20036 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.08■□□□□ 0.97
HLA-DPA1P20036 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.08■□□□□ 0.96
HLA-DPA1P20036 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
HLA-DPA1P20036 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.08■□□□□ 0.96
HLA-DPA1P20036 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.07■□□□□ 0.96
HLA-DPA1P20036 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
HLA-DPA1P20036 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DPA1P20036 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DPA1P20036 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DPA1P20036 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DPA1P20036 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.07■□□□□ 0.96
HLA-DPA1P20036 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DPA1P20036 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DPA1P20036 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
HLA-DPA1P20036 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.07■□□□□ 0.96
HLA-DPA1P20036 KRT18P20-201ENST00000548986 1279 ntBASIC21.07■□□□□ 0.96
HLA-DPA1P20036 KRT18P61-201ENST00000585825 1298 ntBASIC21.07■□□□□ 0.96
HLA-DPA1P20036 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DPA1P20036 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
HLA-DPA1P20036 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
HLA-DPA1P20036 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DPA1P20036 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DPA1P20036 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DPA1P20036 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.06■□□□□ 0.96
HLA-DPA1P20036 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.06■□□□□ 0.96
HLA-DPA1P20036 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
HLA-DPA1P20036 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DPA1P20036 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.06■□□□□ 0.96
HLA-DPA1P20036 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DPA1P20036 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
HLA-DPA1P20036 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DPA1P20036 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DPA1P20036 NTF6G-201ENST00000591094 616 ntBASIC21.06■□□□□ 0.96
HLA-DPA1P20036 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
HLA-DPA1P20036 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DPA1P20036 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
HLA-DPA1P20036 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DPA1P20036 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.06■□□□□ 0.96
HLA-DPA1P20036 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
HLA-DPA1P20036 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms