Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
BMP4P12644 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
BMP4P12644 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.06■□□□□ 0.64
BMP4P12644 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.06■□□□□ 0.64
BMP4P12644 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
BMP4P12644 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.06■□□□□ 0.64
BMP4P12644 PCDHAC2-203ENST00000615316 3011 ntBASIC19.06■□□□□ 0.64
BMP4P12644 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BMP4P12644 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
BMP4P12644 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
BMP4P12644 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
BMP4P12644 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BMP4P12644 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
BMP4P12644 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.05■□□□□ 0.64
BMP4P12644 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.05■□□□□ 0.64
BMP4P12644 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.05■□□□□ 0.64
BMP4P12644 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
BMP4P12644 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.05■□□□□ 0.64
BMP4P12644 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BMP4P12644 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BMP4P12644 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BMP4P12644 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BMP4P12644 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
BMP4P12644 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
BMP4P12644 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
BMP4P12644 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BMP4P12644 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
BMP4P12644 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BMP4P12644 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BMP4P12644 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BMP4P12644 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BMP4P12644 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.04■□□□□ 0.64
BMP4P12644 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BMP4P12644 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BMP4P12644 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.04■□□□□ 0.64
BMP4P12644 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BMP4P12644 LINC01529-204ENST00000636474 1715 ntBASIC19.04■□□□□ 0.64
BMP4P12644 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BMP4P12644 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.04■□□□□ 0.64
BMP4P12644 AC133637.1-201ENST00000624115 1537 ntBASIC19.04■□□□□ 0.64
BMP4P12644 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
BMP4P12644 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
BMP4P12644 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
BMP4P12644 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BMP4P12644 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.04■□□□□ 0.64
BMP4P12644 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.04■□□□□ 0.64
BMP4P12644 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BMP4P12644 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BMP4P12644 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BMP4P12644 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BMP4P12644 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BMP4P12644 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.03■□□□□ 0.64
BMP4P12644 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BMP4P12644 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.03■□□□□ 0.64
BMP4P12644 DUX4L4-201ENST00000566884 1269 ntBASIC19.03■□□□□ 0.64
BMP4P12644 MIR6821-201ENST00000617625 74 ntBASIC19.03■□□□□ 0.64
BMP4P12644 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BMP4P12644 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
BMP4P12644 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.03■□□□□ 0.64
BMP4P12644 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
BMP4P12644 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BMP4P12644 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BMP4P12644 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.03■□□□□ 0.64
BMP4P12644 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.03■□□□□ 0.64
BMP4P12644 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BMP4P12644 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BMP4P12644 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.02■□□□□ 0.64
BMP4P12644 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
BMP4P12644 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
BMP4P12644 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.02■□□□□ 0.64
BMP4P12644 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.02■□□□□ 0.64
BMP4P12644 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
BMP4P12644 AC026271.2-201ENST00000428091 497 ntBASIC19.02■□□□□ 0.64
BMP4P12644 AC097381.1-201ENST00000429019 1296 ntBASIC19.02■□□□□ 0.64
BMP4P12644 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.02■□□□□ 0.64
BMP4P12644 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.02■□□□□ 0.64
BMP4P12644 AL499627.2-201ENST00000606283 725 ntBASIC19.02■□□□□ 0.64
BMP4P12644 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.02■□□□□ 0.64
BMP4P12644 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BMP4P12644 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
BMP4P12644 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
BMP4P12644 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.02■□□□□ 0.63
BMP4P12644 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
BMP4P12644 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
BMP4P12644 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
BMP4P12644 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BMP4P12644 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BMP4P12644 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.01■□□□□ 0.63
BMP4P12644 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
BMP4P12644 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
BMP4P12644 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BMP4P12644 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BMP4P12644 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
BMP4P12644 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BMP4P12644 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
BMP4P12644 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
BMP4P12644 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BMP4P12644 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.01■□□□□ 0.63
BMP4P12644 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.01■□□□□ 0.63
BMP4P12644 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms