Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC22.94■■□□□ 1.26
TPM1P09493 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TPM1P09493 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC22.94■■□□□ 1.26
TPM1P09493 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TPM1P09493 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TPM1P09493 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TPM1P09493 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
TPM1P09493 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
TPM1P09493 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
TPM1P09493 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TPM1P09493 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
TPM1P09493 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TPM1P09493 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TPM1P09493 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.94■■□□□ 1.26
TPM1P09493 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.94■■□□□ 1.26
TPM1P09493 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.94■■□□□ 1.26
TPM1P09493 AL138724.1-201ENST00000606771 1088 ntBASIC22.94■■□□□ 1.26
TPM1P09493 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.94■■□□□ 1.26
TPM1P09493 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TPM1P09493 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
TPM1P09493 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC22.94■■□□□ 1.26
TPM1P09493 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC22.94■■□□□ 1.26
TPM1P09493 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
TPM1P09493 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
TPM1P09493 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
TPM1P09493 AC006128.1-201ENST00000624704 1661 ntBASIC22.93■■□□□ 1.26
TPM1P09493 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC22.93■■□□□ 1.26
TPM1P09493 AP006587.3-201ENST00000525742 1516 ntBASIC22.93■■□□□ 1.26
TPM1P09493 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TPM1P09493 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC22.93■■□□□ 1.26
TPM1P09493 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC22.93■■□□□ 1.26
TPM1P09493 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
TPM1P09493 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
TPM1P09493 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
TPM1P09493 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.93■■□□□ 1.26
TPM1P09493 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TPM1P09493 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TPM1P09493 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TPM1P09493 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TPM1P09493 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.93■■□□□ 1.26
TPM1P09493 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
TPM1P09493 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TPM1P09493 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC22.92■■□□□ 1.26
TPM1P09493 ME2-216ENST00000639850 2331 ntTSL 5 BASIC22.92■■□□□ 1.26
TPM1P09493 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC22.92■■□□□ 1.26
TPM1P09493 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
TPM1P09493 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
TPM1P09493 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
TPM1P09493 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC22.92■■□□□ 1.26
TPM1P09493 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
TPM1P09493 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
TPM1P09493 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
TPM1P09493 DUX4L19-201ENST00000557448 1267 ntBASIC22.91■■□□□ 1.26
TPM1P09493 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC22.91■■□□□ 1.26
TPM1P09493 SYT6-210ENST00000641643 1587 ntBASIC22.91■■□□□ 1.26
TPM1P09493 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC22.91■■□□□ 1.26
TPM1P09493 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
TPM1P09493 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TPM1P09493 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TPM1P09493 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TPM1P09493 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TPM1P09493 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TPM1P09493 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TPM1P09493 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TPM1P09493 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.91■■□□□ 1.26
TPM1P09493 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
TPM1P09493 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TPM1P09493 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.91■■□□□ 1.26
TPM1P09493 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
TPM1P09493 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC22.9■■□□□ 1.26
TPM1P09493 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
TPM1P09493 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.9■■□□□ 1.26
TPM1P09493 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
TPM1P09493 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.26
TPM1P09493 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
TPM1P09493 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
TPM1P09493 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
TPM1P09493 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
TPM1P09493 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
TPM1P09493 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.26
TPM1P09493 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22.89■■□□□ 1.25
TPM1P09493 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
TPM1P09493 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.25
TPM1P09493 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
TPM1P09493 RASSF1-AS1-201ENST00000629828 790 ntBASIC22.89■■□□□ 1.25
TPM1P09493 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
TPM1P09493 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.89■■□□□ 1.25
TPM1P09493 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
TPM1P09493 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
TPM1P09493 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
TPM1P09493 GABARAPL3-202ENST00000624044 1851 ntBASIC22.89■■□□□ 1.25
TPM1P09493 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
TPM1P09493 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC22.89■■□□□ 1.25
TPM1P09493 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
TPM1P09493 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC22.89■■□□□ 1.25
TPM1P09493 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.89■■□□□ 1.25
TPM1P09493 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC22.88■■□□□ 1.25
TPM1P09493 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
TPM1P09493 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TPM1P09493 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms