Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 AL391422.3-201ENST00000603791 2761 ntBASIC18.71■□□□□ 0.59
MRPL3P09001 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MRPL3P09001 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MRPL3P09001 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.71■□□□□ 0.59
MRPL3P09001 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.71■□□□□ 0.59
MRPL3P09001 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MRPL3P09001 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MRPL3P09001 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
MRPL3P09001 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
MRPL3P09001 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
MRPL3P09001 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.71■□□□□ 0.59
MRPL3P09001 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.71■□□□□ 0.59
MRPL3P09001 AC131281.2-201ENST00000520478 145 ntBASIC18.71■□□□□ 0.59
MRPL3P09001 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
MRPL3P09001 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.71■□□□□ 0.59
MRPL3P09001 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MRPL3P09001 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.71■□□□□ 0.59
MRPL3P09001 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
MRPL3P09001 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MRPL3P09001 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.71■□□□□ 0.59
MRPL3P09001 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MRPL3P09001 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.7■□□□□ 0.58
MRPL3P09001 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MRPL3P09001 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.7■□□□□ 0.58
MRPL3P09001 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MRPL3P09001 PCDHAC2-203ENST00000615316 3011 ntBASIC18.7■□□□□ 0.58
MRPL3P09001 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.7■□□□□ 0.58
MRPL3P09001 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MRPL3P09001 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MRPL3P09001 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MRPL3P09001 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
MRPL3P09001 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.7■□□□□ 0.58
MRPL3P09001 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
MRPL3P09001 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.7■□□□□ 0.58
MRPL3P09001 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MRPL3P09001 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.7■□□□□ 0.58
MRPL3P09001 SMUG1P1-201ENST00000590640 811 ntBASIC18.7■□□□□ 0.58
MRPL3P09001 AC073314.1-201ENST00000568729 2216 ntBASIC18.7■□□□□ 0.58
MRPL3P09001 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MRPL3P09001 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MRPL3P09001 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
MRPL3P09001 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MRPL3P09001 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MRPL3P09001 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.69■□□□□ 0.58
MRPL3P09001 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MRPL3P09001 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MRPL3P09001 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MRPL3P09001 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.69■□□□□ 0.58
MRPL3P09001 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
MRPL3P09001 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MRPL3P09001 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.69■□□□□ 0.58
MRPL3P09001 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.69■□□□□ 0.58
MRPL3P09001 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.69■□□□□ 0.58
MRPL3P09001 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.69■□□□□ 0.58
MRPL3P09001 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MRPL3P09001 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
MRPL3P09001 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MRPL3P09001 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.69■□□□□ 0.58
MRPL3P09001 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MRPL3P09001 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.68■□□□□ 0.58
MRPL3P09001 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MRPL3P09001 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.68■□□□□ 0.58
MRPL3P09001 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
MRPL3P09001 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
MRPL3P09001 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
MRPL3P09001 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MRPL3P09001 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MRPL3P09001 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.68■□□□□ 0.58
MRPL3P09001 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.68■□□□□ 0.58
MRPL3P09001 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.68■□□□□ 0.58
MRPL3P09001 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.68■□□□□ 0.58
MRPL3P09001 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MRPL3P09001 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MRPL3P09001 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MRPL3P09001 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.68■□□□□ 0.58
MRPL3P09001 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MRPL3P09001 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.68■□□□□ 0.58
MRPL3P09001 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.68■□□□□ 0.58
MRPL3P09001 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
MRPL3P09001 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
MRPL3P09001 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.68■□□□□ 0.58
MRPL3P09001 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MRPL3P09001 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
MRPL3P09001 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MRPL3P09001 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MRPL3P09001 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
MRPL3P09001 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
MRPL3P09001 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MRPL3P09001 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MRPL3P09001 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.67■□□□□ 0.58
MRPL3P09001 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MRPL3P09001 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.67■□□□□ 0.58
MRPL3P09001 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.67■□□□□ 0.58
MRPL3P09001 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MRPL3P09001 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.67■□□□□ 0.58
MRPL3P09001 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MRPL3P09001 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
MRPL3P09001 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
MRPL3P09001 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
MRPL3P09001 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms