Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 MIR4758-201ENST00000577688 71 ntBASIC21.18■□□□□ 0.98
SRPRAP08240 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.18■□□□□ 0.98
SRPRAP08240 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SRPRAP08240 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
SRPRAP08240 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SRPRAP08240 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SRPRAP08240 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.17■□□□□ 0.98
SRPRAP08240 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRPRAP08240 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRPRAP08240 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.17■□□□□ 0.98
SRPRAP08240 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SRPRAP08240 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
SRPRAP08240 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SRPRAP08240 MIPEPP3-201ENST00000412105 444 ntBASIC21.17■□□□□ 0.98
SRPRAP08240 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRPRAP08240 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRPRAP08240 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.17■□□□□ 0.98
SRPRAP08240 CDV3P1-201ENST00000471403 739 ntBASIC21.17■□□□□ 0.98
SRPRAP08240 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.17■□□□□ 0.98
SRPRAP08240 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.17■□□□□ 0.98
SRPRAP08240 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.17■□□□□ 0.98
SRPRAP08240 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.17■□□□□ 0.98
SRPRAP08240 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SRPRAP08240 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRPRAP08240 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRPRAP08240 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SRPRAP08240 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SRPRAP08240 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRPRAP08240 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRPRAP08240 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.17■□□□□ 0.98
SRPRAP08240 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SRPRAP08240 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.17■□□□□ 0.98
SRPRAP08240 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRPRAP08240 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRPRAP08240 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SRPRAP08240 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRPRAP08240 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRPRAP08240 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRPRAP08240 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRPRAP08240 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.16■□□□□ 0.98
SRPRAP08240 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.16■□□□□ 0.98
SRPRAP08240 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.16■□□□□ 0.98
SRPRAP08240 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
SRPRAP08240 FAM21FP-204ENST00000608637 956 ntBASIC21.16■□□□□ 0.98
SRPRAP08240 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.15■□□□□ 0.98
SRPRAP08240 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRPRAP08240 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRPRAP08240 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.15■□□□□ 0.98
SRPRAP08240 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.15■□□□□ 0.98
SRPRAP08240 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.15■□□□□ 0.98
SRPRAP08240 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SRPRAP08240 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.15■□□□□ 0.98
SRPRAP08240 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.15■□□□□ 0.98
SRPRAP08240 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRPRAP08240 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRPRAP08240 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRPRAP08240 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.14■□□□□ 0.98
SRPRAP08240 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.14■□□□□ 0.98
SRPRAP08240 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SRPRAP08240 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.14■□□□□ 0.98
SRPRAP08240 AC010980.2-201ENST00000587099 1412 ntBASIC21.14■□□□□ 0.98
SRPRAP08240 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SRPRAP08240 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
SRPRAP08240 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SRPRAP08240 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.14■□□□□ 0.97
SRPRAP08240 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SRPRAP08240 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SRPRAP08240 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SRPRAP08240 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.13■□□□□ 0.97
SRPRAP08240 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.13■□□□□ 0.97
SRPRAP08240 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SRPRAP08240 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.13■□□□□ 0.97
SRPRAP08240 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRPRAP08240 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRPRAP08240 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRPRAP08240 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRPRAP08240 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.13■□□□□ 0.97
SRPRAP08240 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SRPRAP08240 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.13■□□□□ 0.97
SRPRAP08240 AC092118.2-201ENST00000613495 667 ntBASIC21.13■□□□□ 0.97
SRPRAP08240 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SRPRAP08240 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRPRAP08240 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.13■□□□□ 0.97
SRPRAP08240 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRPRAP08240 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SRPRAP08240 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRPRAP08240 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
SRPRAP08240 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.12■□□□□ 0.97
SRPRAP08240 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SRPRAP08240 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SRPRAP08240 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRPRAP08240 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
SRPRAP08240 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRPRAP08240 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
SRPRAP08240 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SRPRAP08240 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRPRAP08240 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.12■□□□□ 0.97
SRPRAP08240 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.12■□□□□ 0.97
SRPRAP08240 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRPRAP08240 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms