Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
THBS1P07996 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.22■□□□□ 0.67
THBS1P07996 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.22■□□□□ 0.67
THBS1P07996 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
THBS1P07996 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
THBS1P07996 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
THBS1P07996 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
THBS1P07996 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
THBS1P07996 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
THBS1P07996 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.22■□□□□ 0.67
THBS1P07996 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
THBS1P07996 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
THBS1P07996 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
THBS1P07996 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
THBS1P07996 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
THBS1P07996 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
THBS1P07996 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.21■□□□□ 0.67
THBS1P07996 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
THBS1P07996 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
THBS1P07996 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
THBS1P07996 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.21■□□□□ 0.67
THBS1P07996 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
THBS1P07996 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
THBS1P07996 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
THBS1P07996 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
THBS1P07996 POU5F1P4-201ENST00000413175 1085 ntBASIC19.21■□□□□ 0.67
THBS1P07996 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.21■□□□□ 0.67
THBS1P07996 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.21■□□□□ 0.67
THBS1P07996 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
THBS1P07996 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
THBS1P07996 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
THBS1P07996 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.21■□□□□ 0.67
THBS1P07996 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
THBS1P07996 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.2■□□□□ 0.66
THBS1P07996 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.2■□□□□ 0.66
THBS1P07996 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
THBS1P07996 AC061975.6-201ENST00000579045 1553 ntBASIC19.2■□□□□ 0.66
THBS1P07996 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
THBS1P07996 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
THBS1P07996 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
THBS1P07996 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
THBS1P07996 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
THBS1P07996 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
THBS1P07996 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.2■□□□□ 0.66
THBS1P07996 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
THBS1P07996 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.2■□□□□ 0.66
THBS1P07996 AC008175.2-201ENST00000612840 297 ntBASIC19.2■□□□□ 0.66
THBS1P07996 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.2■□□□□ 0.66
THBS1P07996 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
THBS1P07996 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
THBS1P07996 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
THBS1P07996 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.2■□□□□ 0.66
THBS1P07996 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
THBS1P07996 AC121338.2-201ENST00000622535 1744 ntBASIC19.2■□□□□ 0.66
THBS1P07996 LINC02228-203ENST00000641970 1355 ntBASIC19.19■□□□□ 0.66
THBS1P07996 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.19■□□□□ 0.66
THBS1P07996 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
THBS1P07996 PLK5-205ENST00000642079 1969 ntBASIC19.19■□□□□ 0.66
THBS1P07996 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
THBS1P07996 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.19■□□□□ 0.66
THBS1P07996 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
THBS1P07996 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
THBS1P07996 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
THBS1P07996 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
THBS1P07996 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
THBS1P07996 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.19■□□□□ 0.66
THBS1P07996 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.19■□□□□ 0.66
THBS1P07996 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
THBS1P07996 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.19■□□□□ 0.66
THBS1P07996 AC087623.3-201ENST00000607047 1098 ntBASIC19.19■□□□□ 0.66
THBS1P07996 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.19■□□□□ 0.66
THBS1P07996 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
THBS1P07996 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
THBS1P07996 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
THBS1P07996 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
THBS1P07996 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
THBS1P07996 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
THBS1P07996 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.19■□□□□ 0.66
THBS1P07996 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
THBS1P07996 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
THBS1P07996 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
THBS1P07996 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
THBS1P07996 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
THBS1P07996 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
THBS1P07996 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.18■□□□□ 0.66
THBS1P07996 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
THBS1P07996 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
THBS1P07996 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
THBS1P07996 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.18■□□□□ 0.66
THBS1P07996 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
THBS1P07996 AC138907.5-202ENST00000569484 235 ntBASIC19.18■□□□□ 0.66
THBS1P07996 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
THBS1P07996 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.17■□□□□ 0.66
THBS1P07996 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
THBS1P07996 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
THBS1P07996 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
THBS1P07996 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
THBS1P07996 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
THBS1P07996 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
THBS1P07996 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms