Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.89■□□□□ 0.61
HMGN1P05114 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
HMGN1P05114 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
HMGN1P05114 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.89■□□□□ 0.61
HMGN1P05114 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGN1P05114 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HMGN1P05114 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGN1P05114 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGN1P05114 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGN1P05114 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGN1P05114 AC121338.2-201ENST00000622535 1744 ntBASIC18.88■□□□□ 0.61
HMGN1P05114 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
HMGN1P05114 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
HMGN1P05114 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.88■□□□□ 0.61
HMGN1P05114 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HMGN1P05114 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.88■□□□□ 0.61
HMGN1P05114 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
HMGN1P05114 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.88■□□□□ 0.61
HMGN1P05114 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGN1P05114 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGN1P05114 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HMGN1P05114 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGN1P05114 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HMGN1P05114 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HMGN1P05114 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HMGN1P05114 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.88■□□□□ 0.61
HMGN1P05114 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGN1P05114 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGN1P05114 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGN1P05114 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.88■□□□□ 0.61
HMGN1P05114 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGN1P05114 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGN1P05114 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGN1P05114 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.87■□□□□ 0.61
HMGN1P05114 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGN1P05114 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGN1P05114 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGN1P05114 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGN1P05114 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGN1P05114 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGN1P05114 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
HMGN1P05114 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.87■□□□□ 0.61
HMGN1P05114 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HMGN1P05114 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.87■□□□□ 0.61
HMGN1P05114 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HMGN1P05114 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.87■□□□□ 0.61
HMGN1P05114 MIR4466-201ENST00000606121 54 ntBASIC18.87■□□□□ 0.61
HMGN1P05114 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGN1P05114 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HMGN1P05114 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGN1P05114 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGN1P05114 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
HMGN1P05114 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGN1P05114 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.86■□□□□ 0.61
HMGN1P05114 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGN1P05114 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGN1P05114 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HMGN1P05114 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
HMGN1P05114 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGN1P05114 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HMGN1P05114 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HMGN1P05114 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGN1P05114 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.86■□□□□ 0.61
HMGN1P05114 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.86■□□□□ 0.61
HMGN1P05114 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
HMGN1P05114 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGN1P05114 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGN1P05114 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
HMGN1P05114 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGN1P05114 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGN1P05114 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGN1P05114 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.86■□□□□ 0.61
HMGN1P05114 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.86■□□□□ 0.61
HMGN1P05114 AC092667.1-201ENST00000434301 2586 ntBASIC18.86■□□□□ 0.61
HMGN1P05114 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.86■□□□□ 0.61
HMGN1P05114 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.85■□□□□ 0.61
HMGN1P05114 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
HMGN1P05114 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HMGN1P05114 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HMGN1P05114 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HMGN1P05114 AC009237.3-201ENST00000393279 1427 ntBASIC18.85■□□□□ 0.61
HMGN1P05114 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HMGN1P05114 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGN1P05114 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HMGN1P05114 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGN1P05114 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGN1P05114 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.85■□□□□ 0.61
HMGN1P05114 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HMGN1P05114 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGN1P05114 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
HMGN1P05114 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.85■□□□□ 0.61
HMGN1P05114 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
HMGN1P05114 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HMGN1P05114 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGN1P05114 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
HMGN1P05114 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
HMGN1P05114 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGN1P05114 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HMGN1P05114 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HMGN1P05114 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms