Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SOD1P00441 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SOD1P00441 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SOD1P00441 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SOD1P00441 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SOD1P00441 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.71■□□□□ 0.91
SOD1P00441 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.71■□□□□ 0.91
SOD1P00441 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.71■□□□□ 0.91
SOD1P00441 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.71■□□□□ 0.91
SOD1P00441 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.71■□□□□ 0.91
SOD1P00441 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SOD1P00441 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SOD1P00441 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SOD1P00441 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SOD1P00441 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.7■□□□□ 0.9
SOD1P00441 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
SOD1P00441 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.7■□□□□ 0.9
SOD1P00441 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SOD1P00441 NCF1B-203ENST00000435988 1254 ntBASIC20.7■□□□□ 0.9
SOD1P00441 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SOD1P00441 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SOD1P00441 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SOD1P00441 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.7■□□□□ 0.9
SOD1P00441 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SOD1P00441 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.7■□□□□ 0.9
SOD1P00441 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SOD1P00441 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SOD1P00441 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.7■□□□□ 0.9
SOD1P00441 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.7■□□□□ 0.9
SOD1P00441 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SOD1P00441 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.7■□□□□ 0.9
SOD1P00441 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SOD1P00441 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SOD1P00441 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.69■□□□□ 0.9
SOD1P00441 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.69■□□□□ 0.9
SOD1P00441 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SOD1P00441 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
SOD1P00441 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SOD1P00441 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SOD1P00441 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SOD1P00441 LINC00565-201ENST00000562710 2331 ntBASIC20.69■□□□□ 0.9
SOD1P00441 ID1-201ENST00000376105 1233 ntBASIC20.69■□□□□ 0.9
SOD1P00441 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.69■□□□□ 0.9
SOD1P00441 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.69■□□□□ 0.9
SOD1P00441 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.69■□□□□ 0.9
SOD1P00441 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SOD1P00441 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SOD1P00441 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SOD1P00441 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SOD1P00441 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SOD1P00441 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SOD1P00441 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.68■□□□□ 0.9
SOD1P00441 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SOD1P00441 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SOD1P00441 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SOD1P00441 HLA-L-209ENST00000420110 1011 ntBASIC20.68■□□□□ 0.9
SOD1P00441 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.68■□□□□ 0.9
SOD1P00441 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SOD1P00441 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.68■□□□□ 0.9
SOD1P00441 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SOD1P00441 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SOD1P00441 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SOD1P00441 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.68■□□□□ 0.9
SOD1P00441 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.68■□□□□ 0.9
SOD1P00441 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SOD1P00441 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SOD1P00441 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SOD1P00441 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SOD1P00441 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SOD1P00441 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.67■□□□□ 0.9
SOD1P00441 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SOD1P00441 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SOD1P00441 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SOD1P00441 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SOD1P00441 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SOD1P00441 AC091799.1-201ENST00000422823 811 ntBASIC20.67■□□□□ 0.9
SOD1P00441 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SOD1P00441 CYP2T1P-201ENST00000432607 1285 ntBASIC20.67■□□□□ 0.9
SOD1P00441 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.67■□□□□ 0.9
SOD1P00441 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SOD1P00441 Z98882.1-201ENST00000622160 2253 ntBASIC20.67■□□□□ 0.9
SOD1P00441 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.67■□□□□ 0.9
SOD1P00441 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SOD1P00441 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.67■□□□□ 0.9
SOD1P00441 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SOD1P00441 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SOD1P00441 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SOD1P00441 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SOD1P00441 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
SOD1P00441 AC245052.3-201ENST00000450182 901 ntBASIC20.66■□□□□ 0.9
SOD1P00441 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.66■□□□□ 0.9
SOD1P00441 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.66■□□□□ 0.9
SOD1P00441 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.66■□□□□ 0.9
SOD1P00441 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SOD1P00441 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.66■□□□□ 0.9
SOD1P00441 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SOD1P00441 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SOD1P00441 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SOD1P00441 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.65■□□□□ 0.9
SOD1P00441 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms