Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE6O95741 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE6O95741 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE6O95741 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE6O95741 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE6O95741 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.48■□□□□ 0.87
CPNE6O95741 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE6O95741 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE6O95741 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE6O95741 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.48■□□□□ 0.87
CPNE6O95741 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.48■□□□□ 0.87
CPNE6O95741 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
CPNE6O95741 GUSBP6-202ENST00000438529 1198 ntBASIC20.48■□□□□ 0.87
CPNE6O95741 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.48■□□□□ 0.87
CPNE6O95741 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE6O95741 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE6O95741 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE6O95741 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE6O95741 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE6O95741 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE6O95741 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CPNE6O95741 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE6O95741 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPNE6O95741 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CPNE6O95741 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPNE6O95741 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPNE6O95741 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CPNE6O95741 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPNE6O95741 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.47■□□□□ 0.87
CPNE6O95741 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPNE6O95741 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CPNE6O95741 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPNE6O95741 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CPNE6O95741 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.47■□□□□ 0.87
CPNE6O95741 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.47■□□□□ 0.87
CPNE6O95741 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.47■□□□□ 0.87
CPNE6O95741 AF201337.1-201ENST00000520239 748 ntBASIC20.47■□□□□ 0.87
CPNE6O95741 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.47■□□□□ 0.87
CPNE6O95741 AC133552.2-202ENST00000575694 574 ntBASIC20.47■□□□□ 0.87
CPNE6O95741 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.47■□□□□ 0.87
CPNE6O95741 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.47■□□□□ 0.87
CPNE6O95741 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CPNE6O95741 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.47■□□□□ 0.87
CPNE6O95741 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPNE6O95741 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
CPNE6O95741 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPNE6O95741 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPNE6O95741 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPNE6O95741 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.47■□□□□ 0.87
CPNE6O95741 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CPNE6O95741 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.47■□□□□ 0.87
CPNE6O95741 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.46■□□□□ 0.87
CPNE6O95741 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE6O95741 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE6O95741 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CPNE6O95741 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.46■□□□□ 0.87
CPNE6O95741 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE6O95741 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE6O95741 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CPNE6O95741 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CPNE6O95741 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE6O95741 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
CPNE6O95741 TERF1P5-201ENST00000477545 1207 ntBASIC20.46■□□□□ 0.87
CPNE6O95741 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CPNE6O95741 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.46■□□□□ 0.87
CPNE6O95741 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.46■□□□□ 0.87
CPNE6O95741 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE6O95741 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CPNE6O95741 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CPNE6O95741 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE6O95741 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CPNE6O95741 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.46■□□□□ 0.87
CPNE6O95741 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE6O95741 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE6O95741 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPNE6O95741 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPNE6O95741 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPNE6O95741 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPNE6O95741 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPNE6O95741 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.45■□□□□ 0.86
CPNE6O95741 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CPNE6O95741 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.45■□□□□ 0.86
CPNE6O95741 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CPNE6O95741 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.45■□□□□ 0.86
CPNE6O95741 AC120498.10-201ENST00000621827 505 ntBASIC20.45■□□□□ 0.86
CPNE6O95741 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPNE6O95741 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.45■□□□□ 0.86
CPNE6O95741 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CPNE6O95741 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPNE6O95741 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CPNE6O95741 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPNE6O95741 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPNE6O95741 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPNE6O95741 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CPNE6O95741 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CPNE6O95741 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.44■□□□□ 0.86
CPNE6O95741 CD99P1-205ENST00000527459 561 ntBASIC20.44■□□□□ 0.86
CPNE6O95741 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.44■□□□□ 0.86
CPNE6O95741 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.44■□□□□ 0.86
CPNE6O95741 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms