Protein–RNA interactions for Protein: O95361

TRIM16, Tripartite motif-containing protein 16, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16O95361 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM16O95361 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.97
TRIM16O95361 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM16O95361 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM16O95361 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.14■□□□□ 0.97
TRIM16O95361 ITM2C-210ENST00000620962 501 ntBASIC21.14■□□□□ 0.97
TRIM16O95361 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.14■□□□□ 0.97
TRIM16O95361 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM16O95361 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM16O95361 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM16O95361 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM16O95361 AC010542.4-201ENST00000563151 1910 ntBASIC21.14■□□□□ 0.97
TRIM16O95361 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM16O95361 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
TRIM16O95361 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.13■□□□□ 0.97
TRIM16O95361 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM16O95361 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM16O95361 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.13■□□□□ 0.97
TRIM16O95361 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM16O95361 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM16O95361 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM16O95361 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM16O95361 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM16O95361 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TRIM16O95361 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM16O95361 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.13■□□□□ 0.97
TRIM16O95361 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM16O95361 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM16O95361 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM16O95361 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM16O95361 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM16O95361 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM16O95361 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM16O95361 KRT18P29-201ENST00000397031 1267 ntBASIC21.12■□□□□ 0.97
TRIM16O95361 POU5F1P3-201ENST00000428824 1078 ntBASIC21.12■□□□□ 0.97
TRIM16O95361 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.12■□□□□ 0.97
TRIM16O95361 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
TRIM16O95361 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.12■□□□□ 0.97
TRIM16O95361 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM16O95361 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
TRIM16O95361 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.12■□□□□ 0.97
TRIM16O95361 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM16O95361 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM16O95361 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
TRIM16O95361 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM16O95361 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.11■□□□□ 0.97
TRIM16O95361 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM16O95361 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM16O95361 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM16O95361 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
TRIM16O95361 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.11■□□□□ 0.97
TRIM16O95361 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM16O95361 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM16O95361 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.11■□□□□ 0.97
TRIM16O95361 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.11■□□□□ 0.97
TRIM16O95361 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.11■□□□□ 0.97
TRIM16O95361 DUX4L16-201ENST00000555130 1264 ntBASIC21.11■□□□□ 0.97
TRIM16O95361 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM16O95361 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM16O95361 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM16O95361 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
TRIM16O95361 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM16O95361 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.11■□□□□ 0.97
TRIM16O95361 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM16O95361 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM16O95361 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM16O95361 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM16O95361 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM16O95361 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM16O95361 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.1■□□□□ 0.97
TRIM16O95361 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM16O95361 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.1■□□□□ 0.97
TRIM16O95361 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
TRIM16O95361 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM16O95361 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.1■□□□□ 0.97
TRIM16O95361 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.1■□□□□ 0.97
TRIM16O95361 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.1■□□□□ 0.97
TRIM16O95361 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
TRIM16O95361 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM16O95361 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM16O95361 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM16O95361 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM16O95361 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM16O95361 AP006294.2-201ENST00000641667 209 ntBASIC21.09■□□□□ 0.97
TRIM16O95361 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM16O95361 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM16O95361 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.09■□□□□ 0.97
TRIM16O95361 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
TRIM16O95361 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM16O95361 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.09■□□□□ 0.97
TRIM16O95361 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
TRIM16O95361 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM16O95361 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM16O95361 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM16O95361 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM16O95361 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM16O95361 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM16O95361 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM16O95361 AC009237.3-201ENST00000393279 1427 ntBASIC21.08■□□□□ 0.97
TRIM16O95361 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms