Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
ALX3O95076 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
ALX3O95076 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
ALX3O95076 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.39■□□□□ 0.53
ALX3O95076 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALX3O95076 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ALX3O95076 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALX3O95076 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ALX3O95076 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
ALX3O95076 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.39■□□□□ 0.53
ALX3O95076 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.39■□□□□ 0.53
ALX3O95076 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
ALX3O95076 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALX3O95076 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALX3O95076 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALX3O95076 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ALX3O95076 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
ALX3O95076 AC026471.6-201ENST00000622954 1905 ntBASIC18.39■□□□□ 0.53
ALX3O95076 FEM1AP4-201ENST00000443167 1987 ntBASIC18.39■□□□□ 0.53
ALX3O95076 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ALX3O95076 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
ALX3O95076 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.38■□□□□ 0.53
ALX3O95076 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALX3O95076 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALX3O95076 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.38■□□□□ 0.53
ALX3O95076 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ALX3O95076 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.38■□□□□ 0.53
ALX3O95076 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.38■□□□□ 0.53
ALX3O95076 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALX3O95076 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ALX3O95076 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALX3O95076 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ALX3O95076 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALX3O95076 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.38■□□□□ 0.53
ALX3O95076 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ALX3O95076 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.37■□□□□ 0.53
ALX3O95076 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ALX3O95076 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ALX3O95076 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
ALX3O95076 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.37■□□□□ 0.53
ALX3O95076 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ALX3O95076 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
ALX3O95076 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ALX3O95076 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ALX3O95076 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ALX3O95076 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.37■□□□□ 0.53
ALX3O95076 AC011298.3-201ENST00000615796 283 ntBASIC18.37■□□□□ 0.53
ALX3O95076 AC136469.2-201ENST00000623944 1028 ntBASIC18.37■□□□□ 0.53
ALX3O95076 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
ALX3O95076 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ALX3O95076 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.37■□□□□ 0.53
ALX3O95076 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ALX3O95076 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ALX3O95076 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ALX3O95076 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ALX3O95076 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ALX3O95076 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
ALX3O95076 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
ALX3O95076 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
ALX3O95076 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
ALX3O95076 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.36■□□□□ 0.53
ALX3O95076 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
ALX3O95076 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ALX3O95076 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ALX3O95076 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ALX3O95076 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.36■□□□□ 0.53
ALX3O95076 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ALX3O95076 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.36■□□□□ 0.53
ALX3O95076 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ALX3O95076 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.36■□□□□ 0.53
ALX3O95076 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.36■□□□□ 0.53
ALX3O95076 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.36■□□□□ 0.53
ALX3O95076 AC010525.1-201ENST00000585559 441 ntBASIC18.36■□□□□ 0.53
ALX3O95076 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ALX3O95076 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
ALX3O95076 SYT6-210ENST00000641643 1587 ntBASIC18.36■□□□□ 0.53
ALX3O95076 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.36■□□□□ 0.53
ALX3O95076 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALX3O95076 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALX3O95076 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALX3O95076 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALX3O95076 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ALX3O95076 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ALX3O95076 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALX3O95076 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALX3O95076 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALX3O95076 SERBP1P1-201ENST00000396021 1160 ntBASIC18.35■□□□□ 0.53
ALX3O95076 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.35■□□□□ 0.53
ALX3O95076 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ALX3O95076 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALX3O95076 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALX3O95076 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALX3O95076 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ALX3O95076 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALX3O95076 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ALX3O95076 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ALX3O95076 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
ALX3O95076 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ALX3O95076 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.34■□□□□ 0.53
ALX3O95076 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms