Protein–RNA interactions for Protein: O75818

RPP40, Ribonuclease P protein subunit p40, humanhuman

Known RBP Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40O75818 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPP40O75818 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPP40O75818 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.48■■□□□ 1.03
RPP40O75818 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RPP40O75818 AP004607.7-201ENST00000527152 1677 ntBASIC21.48■■□□□ 1.03
RPP40O75818 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
RPP40O75818 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPP40O75818 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPP40O75818 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RPP40O75818 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.48■■□□□ 1.03
RPP40O75818 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RPP40O75818 CYP2T1P-201ENST00000432607 1285 ntBASIC21.48■■□□□ 1.03
RPP40O75818 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.48■■□□□ 1.03
RPP40O75818 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.48■■□□□ 1.03
RPP40O75818 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPP40O75818 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPP40O75818 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RPP40O75818 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPP40O75818 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RPP40O75818 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.48■■□□□ 1.03
RPP40O75818 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RPP40O75818 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RPP40O75818 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.47■■□□□ 1.03
RPP40O75818 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RPP40O75818 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.47■■□□□ 1.03
RPP40O75818 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.47■■□□□ 1.03
RPP40O75818 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPP40O75818 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPP40O75818 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPP40O75818 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RPP40O75818 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.47■■□□□ 1.03
RPP40O75818 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
RPP40O75818 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RPP40O75818 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.47■■□□□ 1.03
RPP40O75818 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.47■■□□□ 1.03
RPP40O75818 TERF1P5-201ENST00000477545 1207 ntBASIC21.47■■□□□ 1.03
RPP40O75818 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.47■■□□□ 1.03
RPP40O75818 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPP40O75818 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPP40O75818 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPP40O75818 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPP40O75818 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPP40O75818 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RPP40O75818 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPP40O75818 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.46■■□□□ 1.03
RPP40O75818 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.46■■□□□ 1.03
RPP40O75818 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RPP40O75818 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
RPP40O75818 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPP40O75818 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
RPP40O75818 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.46■■□□□ 1.03
RPP40O75818 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.46■■□□□ 1.03
RPP40O75818 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
RPP40O75818 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPP40O75818 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RPP40O75818 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.46■■□□□ 1.03
RPP40O75818 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPP40O75818 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPP40O75818 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.46■■□□□ 1.03
RPP40O75818 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPP40O75818 AC068338.2-201ENST00000563278 1430 ntBASIC21.46■■□□□ 1.03
RPP40O75818 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPP40O75818 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.45■■□□□ 1.02
RPP40O75818 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPP40O75818 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.45■■□□□ 1.02
RPP40O75818 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.45■■□□□ 1.02
RPP40O75818 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.45■■□□□ 1.02
RPP40O75818 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.45■■□□□ 1.02
RPP40O75818 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RPP40O75818 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.45■■□□□ 1.02
RPP40O75818 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
RPP40O75818 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPP40O75818 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
RPP40O75818 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.45■■□□□ 1.02
RPP40O75818 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPP40O75818 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPP40O75818 AC026471.6-201ENST00000622954 1905 ntBASIC21.45■■□□□ 1.02
RPP40O75818 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPP40O75818 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RPP40O75818 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RPP40O75818 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
RPP40O75818 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.44■■□□□ 1.02
RPP40O75818 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.44■■□□□ 1.02
RPP40O75818 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RPP40O75818 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.44■■□□□ 1.02
RPP40O75818 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RPP40O75818 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
RPP40O75818 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.44■■□□□ 1.02
RPP40O75818 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RPP40O75818 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.44■■□□□ 1.02
RPP40O75818 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.44■■□□□ 1.02
RPP40O75818 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.44■■□□□ 1.02
RPP40O75818 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.44■■□□□ 1.02
RPP40O75818 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
RPP40O75818 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RPP40O75818 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RPP40O75818 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.44■■□□□ 1.02
RPP40O75818 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
RPP40O75818 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RPP40O75818 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms