Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF13O43567 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
RNF13O43567 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF13O43567 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.98■□□□□ 0.63
RNF13O43567 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF13O43567 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF13O43567 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF13O43567 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF13O43567 AC092667.1-201ENST00000434301 2586 ntBASIC18.98■□□□□ 0.63
RNF13O43567 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF13O43567 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF13O43567 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF13O43567 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF13O43567 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF13O43567 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF13O43567 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF13O43567 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF13O43567 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF13O43567 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF13O43567 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RNF13O43567 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF13O43567 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RNF13O43567 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF13O43567 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RNF13O43567 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RNF13O43567 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF13O43567 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF13O43567 AC012414.1-201ENST00000556676 535 ntBASIC18.97■□□□□ 0.63
RNF13O43567 AL354811.1-201ENST00000610286 706 ntBASIC18.97■□□□□ 0.63
RNF13O43567 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF13O43567 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF13O43567 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF13O43567 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RNF13O43567 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
RNF13O43567 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF13O43567 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF13O43567 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF13O43567 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNF13O43567 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.96■□□□□ 0.63
RNF13O43567 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.96■□□□□ 0.63
RNF13O43567 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF13O43567 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF13O43567 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RNF13O43567 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF13O43567 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF13O43567 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF13O43567 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RNF13O43567 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF13O43567 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF13O43567 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.96■□□□□ 0.63
RNF13O43567 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.96■□□□□ 0.63
RNF13O43567 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.96■□□□□ 0.63
RNF13O43567 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNF13O43567 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF13O43567 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.96■□□□□ 0.63
RNF13O43567 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF13O43567 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF13O43567 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF13O43567 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RNF13O43567 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF13O43567 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.96■□□□□ 0.63
RNF13O43567 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF13O43567 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF13O43567 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF13O43567 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.95■□□□□ 0.62
RNF13O43567 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RNF13O43567 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF13O43567 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF13O43567 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF13O43567 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RNF13O43567 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF13O43567 MIR638-201ENST00000385237 100 ntBASIC18.95■□□□□ 0.62
RNF13O43567 AC105265.2-201ENST00000467189 838 ntBASIC18.95■□□□□ 0.62
RNF13O43567 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.95■□□□□ 0.62
RNF13O43567 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF13O43567 AL358852.1-201ENST00000623174 1268 ntBASIC18.95■□□□□ 0.62
RNF13O43567 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF13O43567 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF13O43567 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF13O43567 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RNF13O43567 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF13O43567 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.95■□□□□ 0.62
RNF13O43567 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.95■□□□□ 0.62
RNF13O43567 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF13O43567 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF13O43567 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF13O43567 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.95■□□□□ 0.62
RNF13O43567 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RNF13O43567 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF13O43567 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF13O43567 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF13O43567 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF13O43567 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF13O43567 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF13O43567 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF13O43567 IRS3P-201ENST00000223076 1006 ntBASIC18.94■□□□□ 0.62
RNF13O43567 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.94■□□□□ 0.62
RNF13O43567 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RNF13O43567 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF13O43567 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms