Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PROM1O43490 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PROM1O43490 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PROM1O43490 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PROM1O43490 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
PROM1O43490 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
PROM1O43490 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PROM1O43490 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
PROM1O43490 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PROM1O43490 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.83■□□□□ 0.77
PROM1O43490 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.83■□□□□ 0.77
PROM1O43490 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.83■□□□□ 0.77
PROM1O43490 AC008175.2-201ENST00000612840 297 ntBASIC19.83■□□□□ 0.77
PROM1O43490 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.83■□□□□ 0.76
PROM1O43490 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PROM1O43490 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PROM1O43490 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
PROM1O43490 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
PROM1O43490 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.83■□□□□ 0.76
PROM1O43490 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.82■□□□□ 0.76
PROM1O43490 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PROM1O43490 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PROM1O43490 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.82■□□□□ 0.76
PROM1O43490 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PROM1O43490 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PROM1O43490 AL137060.1-201ENST00000618151 2648 ntBASIC19.82■□□□□ 0.76
PROM1O43490 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PROM1O43490 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
PROM1O43490 POU5F1P4-201ENST00000413175 1085 ntBASIC19.82■□□□□ 0.76
PROM1O43490 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.82■□□□□ 0.76
PROM1O43490 AC010141.2-201ENST00000452426 721 ntBASIC19.82■□□□□ 0.76
PROM1O43490 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.82■□□□□ 0.76
PROM1O43490 KRT18P61-201ENST00000585825 1298 ntBASIC19.82■□□□□ 0.76
PROM1O43490 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PROM1O43490 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
PROM1O43490 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
PROM1O43490 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
PROM1O43490 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
PROM1O43490 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.81■□□□□ 0.76
PROM1O43490 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PROM1O43490 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
PROM1O43490 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.76
PROM1O43490 AF106564.1-201ENST00000607058 2553 ntBASIC19.81■□□□□ 0.76
PROM1O43490 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PROM1O43490 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PROM1O43490 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PROM1O43490 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.81■□□□□ 0.76
PROM1O43490 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
PROM1O43490 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.81■□□□□ 0.76
PROM1O43490 NTF6G-201ENST00000591094 616 ntBASIC19.81■□□□□ 0.76
PROM1O43490 AP001160.3-201ENST00000601484 763 ntBASIC19.81■□□□□ 0.76
PROM1O43490 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
PROM1O43490 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PROM1O43490 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PROM1O43490 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.81■□□□□ 0.76
PROM1O43490 AC005229.4-201ENST00000610085 2198 ntBASIC19.81■□□□□ 0.76
PROM1O43490 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PROM1O43490 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PROM1O43490 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.81■□□□□ 0.76
PROM1O43490 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PROM1O43490 AL121603.2-201ENST00000557373 2117 ntBASIC19.81■□□□□ 0.76
PROM1O43490 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PROM1O43490 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.8■□□□□ 0.76
PROM1O43490 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PROM1O43490 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PROM1O43490 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PROM1O43490 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PROM1O43490 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PROM1O43490 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PROM1O43490 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
PROM1O43490 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.8■□□□□ 0.76
PROM1O43490 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
PROM1O43490 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PROM1O43490 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PROM1O43490 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PROM1O43490 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PROM1O43490 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PROM1O43490 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PROM1O43490 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PROM1O43490 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PROM1O43490 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.79■□□□□ 0.76
PROM1O43490 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PROM1O43490 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PROM1O43490 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PROM1O43490 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PROM1O43490 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.79■□□□□ 0.76
PROM1O43490 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.79■□□□□ 0.76
PROM1O43490 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PROM1O43490 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PROM1O43490 KRT19P1-201ENST00000405746 1186 ntBASIC19.79■□□□□ 0.76
PROM1O43490 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.79■□□□□ 0.76
PROM1O43490 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.79■□□□□ 0.76
PROM1O43490 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.79■□□□□ 0.76
PROM1O43490 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PROM1O43490 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PROM1O43490 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PROM1O43490 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PROM1O43490 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PROM1O43490 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.78■□□□□ 0.76
PROM1O43490 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms