Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.45■□□□□ 0.7
KPNA4O00629 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
KPNA4O00629 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
KPNA4O00629 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.45■□□□□ 0.7
KPNA4O00629 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KPNA4O00629 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KPNA4O00629 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.44■□□□□ 0.7
KPNA4O00629 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.44■□□□□ 0.7
KPNA4O00629 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
KPNA4O00629 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
KPNA4O00629 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KPNA4O00629 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KPNA4O00629 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
KPNA4O00629 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
KPNA4O00629 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.44■□□□□ 0.7
KPNA4O00629 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
KPNA4O00629 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
KPNA4O00629 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
KPNA4O00629 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KPNA4O00629 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KPNA4O00629 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
KPNA4O00629 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.44■□□□□ 0.7
KPNA4O00629 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.44■□□□□ 0.7
KPNA4O00629 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KPNA4O00629 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.44■□□□□ 0.7
KPNA4O00629 AP005435.1-201ENST00000529293 1178 ntBASIC19.44■□□□□ 0.7
KPNA4O00629 AC104564.3-201ENST00000582367 638 ntBASIC19.44■□□□□ 0.7
KPNA4O00629 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KPNA4O00629 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KPNA4O00629 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
KPNA4O00629 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.44■□□□□ 0.7
KPNA4O00629 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KPNA4O00629 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.44■□□□□ 0.7
KPNA4O00629 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KPNA4O00629 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KPNA4O00629 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.43■□□□□ 0.7
KPNA4O00629 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
KPNA4O00629 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KPNA4O00629 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.43■□□□□ 0.7
KPNA4O00629 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.43■□□□□ 0.7
KPNA4O00629 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KPNA4O00629 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
KPNA4O00629 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
KPNA4O00629 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.43■□□□□ 0.7
KPNA4O00629 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KPNA4O00629 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.43■□□□□ 0.7
KPNA4O00629 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KPNA4O00629 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
KPNA4O00629 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
KPNA4O00629 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
KPNA4O00629 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
KPNA4O00629 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.43■□□□□ 0.7
KPNA4O00629 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.43■□□□□ 0.7
KPNA4O00629 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
KPNA4O00629 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KPNA4O00629 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
KPNA4O00629 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KPNA4O00629 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KPNA4O00629 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.42■□□□□ 0.7
KPNA4O00629 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
KPNA4O00629 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
KPNA4O00629 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
KPNA4O00629 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KPNA4O00629 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KPNA4O00629 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
KPNA4O00629 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.42■□□□□ 0.7
KPNA4O00629 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.42■□□□□ 0.7
KPNA4O00629 AL136162.1-201ENST00000607711 1078 ntBASIC19.42■□□□□ 0.7
KPNA4O00629 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.42■□□□□ 0.7
KPNA4O00629 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.42■□□□□ 0.7
KPNA4O00629 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KPNA4O00629 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
KPNA4O00629 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KPNA4O00629 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
KPNA4O00629 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.42■□□□□ 0.7
KPNA4O00629 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.42■□□□□ 0.7
KPNA4O00629 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.42■□□□□ 0.7
KPNA4O00629 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KPNA4O00629 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
KPNA4O00629 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KPNA4O00629 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KPNA4O00629 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
KPNA4O00629 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KPNA4O00629 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.41■□□□□ 0.7
KPNA4O00629 AC024257.2-201ENST00000549699 147 ntBASIC19.41■□□□□ 0.7
KPNA4O00629 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
KPNA4O00629 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KPNA4O00629 LINC01006-201ENST00000333319 2292 ntBASIC19.41■□□□□ 0.7
KPNA4O00629 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
KPNA4O00629 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KPNA4O00629 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
KPNA4O00629 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KPNA4O00629 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.41■□□□□ 0.7
KPNA4O00629 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
KPNA4O00629 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
KPNA4O00629 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KPNA4O00629 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.41■□□□□ 0.7
KPNA4O00629 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KPNA4O00629 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KPNA4O00629 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms