Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.57■■□□□ 1.36
DDX39AO00148 APTR-203ENST00000430801 583 ntTSL 5 BASIC23.57■■□□□ 1.36
DDX39AO00148 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC23.57■■□□□ 1.36
DDX39AO00148 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
DDX39AO00148 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
DDX39AO00148 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
DDX39AO00148 AC068338.2-201ENST00000563278 1430 ntBASIC23.57■■□□□ 1.36
DDX39AO00148 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
DDX39AO00148 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
DDX39AO00148 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX39AO00148 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX39AO00148 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX39AO00148 GPX1P1-201ENST00000388829 606 ntBASIC23.56■■□□□ 1.36
DDX39AO00148 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC23.56■■□□□ 1.36
DDX39AO00148 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC23.56■■□□□ 1.36
DDX39AO00148 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
DDX39AO00148 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX39AO00148 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
DDX39AO00148 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC23.56■■□□□ 1.36
DDX39AO00148 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC23.56■■□□□ 1.36
DDX39AO00148 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX39AO00148 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX39AO00148 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC23.55■■□□□ 1.36
DDX39AO00148 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
DDX39AO00148 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
DDX39AO00148 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
DDX39AO00148 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
DDX39AO00148 CYP2T1P-201ENST00000432607 1285 ntBASIC23.55■■□□□ 1.36
DDX39AO00148 AC083906.2-201ENST00000511578 360 ntBASIC23.55■■□□□ 1.36
DDX39AO00148 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC23.55■■□□□ 1.36
DDX39AO00148 AL121832.2-201ENST00000610979 668 ntBASIC23.55■■□□□ 1.36
DDX39AO00148 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
DDX39AO00148 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
DDX39AO00148 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
DDX39AO00148 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
DDX39AO00148 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC23.55■■□□□ 1.36
DDX39AO00148 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC23.55■■□□□ 1.36
DDX39AO00148 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
DDX39AO00148 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC23.54■■□□□ 1.36
DDX39AO00148 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC23.54■■□□□ 1.36
DDX39AO00148 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
DDX39AO00148 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
DDX39AO00148 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
DDX39AO00148 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
DDX39AO00148 AL355802.2-201ENST00000402069 882 ntBASIC23.54■■□□□ 1.36
DDX39AO00148 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC23.54■■□□□ 1.36
DDX39AO00148 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
DDX39AO00148 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC23.54■■□□□ 1.36
DDX39AO00148 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
DDX39AO00148 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC23.54■■□□□ 1.36
DDX39AO00148 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
DDX39AO00148 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
DDX39AO00148 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
DDX39AO00148 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
DDX39AO00148 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
DDX39AO00148 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
DDX39AO00148 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC23.53■■□□□ 1.36
DDX39AO00148 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
DDX39AO00148 METTL15-202ENST00000403099 795 ntTSL 5 BASIC23.53■■□□□ 1.36
DDX39AO00148 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC23.53■■□□□ 1.36
DDX39AO00148 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC23.53■■□□□ 1.36
DDX39AO00148 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
DDX39AO00148 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
DDX39AO00148 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
DDX39AO00148 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
DDX39AO00148 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC23.52■■□□□ 1.36
DDX39AO00148 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
DDX39AO00148 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.52■■□□□ 1.36
DDX39AO00148 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
DDX39AO00148 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
DDX39AO00148 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC23.52■■□□□ 1.36
DDX39AO00148 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
DDX39AO00148 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.52■■□□□ 1.36
DDX39AO00148 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
DDX39AO00148 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.52■■□□□ 1.36
DDX39AO00148 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.52■■□□□ 1.36
DDX39AO00148 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC23.52■■□□□ 1.36
DDX39AO00148 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC23.52■■□□□ 1.36
DDX39AO00148 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
DDX39AO00148 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
DDX39AO00148 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
DDX39AO00148 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
DDX39AO00148 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC23.51■■□□□ 1.35
DDX39AO00148 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
DDX39AO00148 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
DDX39AO00148 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC23.51■■□□□ 1.35
DDX39AO00148 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC23.51■■□□□ 1.35
DDX39AO00148 AC007322.4-201ENST00000509611 723 ntBASIC23.51■■□□□ 1.35
DDX39AO00148 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC23.51■■□□□ 1.35
DDX39AO00148 AC105036.2-201ENST00000569468 176 ntBASIC23.51■■□□□ 1.35
DDX39AO00148 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC23.51■■□□□ 1.35
DDX39AO00148 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
DDX39AO00148 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
DDX39AO00148 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
DDX39AO00148 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.51■■□□□ 1.35
DDX39AO00148 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.51■■□□□ 1.35
DDX39AO00148 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
DDX39AO00148 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
DDX39AO00148 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
DDX39AO00148 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms