Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
SRRM4A7MD48 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
SRRM4A7MD48 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
SRRM4A7MD48 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
SRRM4A7MD48 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SRRM4A7MD48 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SRRM4A7MD48 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SRRM4A7MD48 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
SRRM4A7MD48 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SRRM4A7MD48 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.83■□□□□ 0.28
SRRM4A7MD48 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SRRM4A7MD48 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.83■□□□□ 0.28
SRRM4A7MD48 AC053503.5-201ENST00000601508 636 ntBASIC16.83■□□□□ 0.28
SRRM4A7MD48 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.83■□□□□ 0.28
SRRM4A7MD48 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SRRM4A7MD48 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SRRM4A7MD48 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SRRM4A7MD48 PLK5-205ENST00000642079 1969 ntBASIC16.82■□□□□ 0.28
SRRM4A7MD48 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRRM4A7MD48 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.82■□□□□ 0.28
SRRM4A7MD48 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRRM4A7MD48 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRRM4A7MD48 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRRM4A7MD48 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRRM4A7MD48 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
SRRM4A7MD48 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SRRM4A7MD48 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SRRM4A7MD48 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRRM4A7MD48 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRRM4A7MD48 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SRRM4A7MD48 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.81■□□□□ 0.28
SRRM4A7MD48 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SRRM4A7MD48 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
SRRM4A7MD48 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SRRM4A7MD48 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SRRM4A7MD48 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
SRRM4A7MD48 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SRRM4A7MD48 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.81■□□□□ 0.28
SRRM4A7MD48 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
SRRM4A7MD48 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SRRM4A7MD48 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.81■□□□□ 0.28
SRRM4A7MD48 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRRM4A7MD48 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SRRM4A7MD48 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SRRM4A7MD48 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRRM4A7MD48 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRRM4A7MD48 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.8■□□□□ 0.28
SRRM4A7MD48 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
SRRM4A7MD48 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRRM4A7MD48 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRRM4A7MD48 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SRRM4A7MD48 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRRM4A7MD48 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SRRM4A7MD48 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRRM4A7MD48 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SRRM4A7MD48 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRRM4A7MD48 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SRRM4A7MD48 AC061975.6-201ENST00000579045 1553 ntBASIC16.8■□□□□ 0.28
SRRM4A7MD48 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SRRM4A7MD48 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16.8■□□□□ 0.28
SRRM4A7MD48 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SRRM4A7MD48 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRRM4A7MD48 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRRM4A7MD48 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SRRM4A7MD48 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SRRM4A7MD48 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRRM4A7MD48 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRRM4A7MD48 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.79■□□□□ 0.28
SRRM4A7MD48 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.79■□□□□ 0.28
SRRM4A7MD48 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC16.79■□□□□ 0.28
SRRM4A7MD48 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRRM4A7MD48 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SRRM4A7MD48 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRRM4A7MD48 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SRRM4A7MD48 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.79■□□□□ 0.28
SRRM4A7MD48 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SRRM4A7MD48 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRRM4A7MD48 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SRRM4A7MD48 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC16.79■□□□□ 0.28
SRRM4A7MD48 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SRRM4A7MD48 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SRRM4A7MD48 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRRM4A7MD48 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.78■□□□□ 0.28
SRRM4A7MD48 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SRRM4A7MD48 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.78■□□□□ 0.28
SRRM4A7MD48 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SRRM4A7MD48 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.78■□□□□ 0.28
SRRM4A7MD48 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SRRM4A7MD48 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SRRM4A7MD48 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SRRM4A7MD48 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRRM4A7MD48 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRRM4A7MD48 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.78■□□□□ 0.28
SRRM4A7MD48 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC16.78■□□□□ 0.28
SRRM4A7MD48 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRRM4A7MD48 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
SRRM4A7MD48 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
SRRM4A7MD48 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRRM4A7MD48 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.78■□□□□ 0.28
SRRM4A7MD48 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms