Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TCRBV9S1A1TA0A576 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
TCRBV9S1A1TA0A576 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TCRBV9S1A1TA0A576 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TCRBV9S1A1TA0A576 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TCRBV9S1A1TA0A576 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.05■□□□□ 0.96
TCRBV9S1A1TA0A576 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TCRBV9S1A1TA0A576 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.05■□□□□ 0.96
TCRBV9S1A1TA0A576 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TCRBV9S1A1TA0A576 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TCRBV9S1A1TA0A576 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TCRBV9S1A1TA0A576 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
TCRBV9S1A1TA0A576 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.05■□□□□ 0.96
TCRBV9S1A1TA0A576 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TCRBV9S1A1TA0A576 AC135279.3-201ENST00000610945 1311 ntBASIC21.04■□□□□ 0.96
TCRBV9S1A1TA0A576 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
TCRBV9S1A1TA0A576 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.04■□□□□ 0.96
TCRBV9S1A1TA0A576 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
TCRBV9S1A1TA0A576 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
TCRBV9S1A1TA0A576 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.04■□□□□ 0.96
TCRBV9S1A1TA0A576 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TCRBV9S1A1TA0A576 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TCRBV9S1A1TA0A576 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TCRBV9S1A1TA0A576 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.04■□□□□ 0.96
TCRBV9S1A1TA0A576 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TCRBV9S1A1TA0A576 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.04■□□□□ 0.96
TCRBV9S1A1TA0A576 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.04■□□□□ 0.96
TCRBV9S1A1TA0A576 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.04■□□□□ 0.96
TCRBV9S1A1TA0A576 AC005224.4-201ENST00000583262 1652 ntBASIC21.04■□□□□ 0.96
TCRBV9S1A1TA0A576 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TCRBV9S1A1TA0A576 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TCRBV9S1A1TA0A576 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TCRBV9S1A1TA0A576 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TCRBV9S1A1TA0A576 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.04■□□□□ 0.96
TCRBV9S1A1TA0A576 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
TCRBV9S1A1TA0A576 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TCRBV9S1A1TA0A576 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.03■□□□□ 0.96
TCRBV9S1A1TA0A576 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.03■□□□□ 0.96
TCRBV9S1A1TA0A576 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.03■□□□□ 0.96
TCRBV9S1A1TA0A576 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
TCRBV9S1A1TA0A576 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TCRBV9S1A1TA0A576 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
TCRBV9S1A1TA0A576 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TCRBV9S1A1TA0A576 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.03■□□□□ 0.96
TCRBV9S1A1TA0A576 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.03■□□□□ 0.96
TCRBV9S1A1TA0A576 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TCRBV9S1A1TA0A576 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TCRBV9S1A1TA0A576 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
TCRBV9S1A1TA0A576 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TCRBV9S1A1TA0A576 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TCRBV9S1A1TA0A576 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.02■□□□□ 0.96
TCRBV9S1A1TA0A576 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
TCRBV9S1A1TA0A576 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TCRBV9S1A1TA0A576 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
TCRBV9S1A1TA0A576 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.02■□□□□ 0.96
TCRBV9S1A1TA0A576 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.02■□□□□ 0.96
TCRBV9S1A1TA0A576 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
TCRBV9S1A1TA0A576 AC027702.1-201ENST00000563810 1770 ntBASIC21.02■□□□□ 0.96
TCRBV9S1A1TA0A576 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.02■□□□□ 0.96
TCRBV9S1A1TA0A576 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TCRBV9S1A1TA0A576 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
TCRBV9S1A1TA0A576 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.95
TCRBV9S1A1TA0A576 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TCRBV9S1A1TA0A576 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TCRBV9S1A1TA0A576 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TCRBV9S1A1TA0A576 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TCRBV9S1A1TA0A576 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.01■□□□□ 0.95
TCRBV9S1A1TA0A576 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TCRBV9S1A1TA0A576 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TCRBV9S1A1TA0A576 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TCRBV9S1A1TA0A576 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.01■□□□□ 0.95
TCRBV9S1A1TA0A576 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
TCRBV9S1A1TA0A576 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TCRBV9S1A1TA0A576 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TCRBV9S1A1TA0A576 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.01■□□□□ 0.95
TCRBV9S1A1TA0A576 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
TCRBV9S1A1TA0A576 AC008764.7-201ENST00000593779 1081 ntBASIC21.01■□□□□ 0.95
TCRBV9S1A1TA0A576 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.01■□□□□ 0.95
TCRBV9S1A1TA0A576 AC105233.4-201ENST00000642045 216 ntBASIC21.01■□□□□ 0.95
TCRBV9S1A1TA0A576 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TCRBV9S1A1TA0A576 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TCRBV9S1A1TA0A576 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
TCRBV9S1A1TA0A576 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TCRBV9S1A1TA0A576 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TCRBV9S1A1TA0A576 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
TCRBV9S1A1TA0A576 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TCRBV9S1A1TA0A576 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21■□□□□ 0.95
TCRBV9S1A1TA0A576 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TCRBV9S1A1TA0A576 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21■□□□□ 0.95
TCRBV9S1A1TA0A576 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TCRBV9S1A1TA0A576 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TCRBV9S1A1TA0A576 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
TCRBV9S1A1TA0A576 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TCRBV9S1A1TA0A576 AC007225.1-201ENST00000566331 1836 ntBASIC21■□□□□ 0.95
TCRBV9S1A1TA0A576 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21■□□□□ 0.95
TCRBV9S1A1TA0A576 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21■□□□□ 0.95
TCRBV9S1A1TA0A576 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21■□□□□ 0.95
TCRBV9S1A1TA0A576 FXN-202ENST00000396364 980 ntTSL 5 BASIC21■□□□□ 0.95
TCRBV9S1A1TA0A576 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21■□□□□ 0.95
TCRBV9S1A1TA0A576 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms