Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 POU5F1P4-201ENST00000413175 1085 ntBASIC14.74□□□□□ -0.05
TRBV6-4A0A1B0GX49 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-4A0A1B0GX49 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TRBV6-4A0A1B0GX49 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC14.74□□□□□ -0.05
TRBV6-4A0A1B0GX49 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-4A0A1B0GX49 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC14.74□□□□□ -0.05
TRBV6-4A0A1B0GX49 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-4A0A1B0GX49 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-4A0A1B0GX49 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC14.74□□□□□ -0.05
TRBV6-4A0A1B0GX49 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-4A0A1B0GX49 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-4A0A1B0GX49 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-4A0A1B0GX49 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC14.74□□□□□ -0.05
TRBV6-4A0A1B0GX49 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC14.74□□□□□ -0.05
TRBV6-4A0A1B0GX49 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV6-4A0A1B0GX49 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV6-4A0A1B0GX49 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV6-4A0A1B0GX49 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV6-4A0A1B0GX49 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC14.73□□□□□ -0.05
TRBV6-4A0A1B0GX49 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV6-4A0A1B0GX49 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV6-4A0A1B0GX49 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV6-4A0A1B0GX49 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
TRBV6-4A0A1B0GX49 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV6-4A0A1B0GX49 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV6-4A0A1B0GX49 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TRBV6-4A0A1B0GX49 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TRBV6-4A0A1B0GX49 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV6-4A0A1B0GX49 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC14.73□□□□□ -0.05
TRBV6-4A0A1B0GX49 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC14.73□□□□□ -0.05
TRBV6-4A0A1B0GX49 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV6-4A0A1B0GX49 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV6-4A0A1B0GX49 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV6-4A0A1B0GX49 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-4A0A1B0GX49 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC14.72□□□□□ -0.05
TRBV6-4A0A1B0GX49 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-4A0A1B0GX49 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-4A0A1B0GX49 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TRBV6-4A0A1B0GX49 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-4A0A1B0GX49 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
TRBV6-4A0A1B0GX49 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-4A0A1B0GX49 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-4A0A1B0GX49 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-4A0A1B0GX49 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-4A0A1B0GX49 AC123595.1-201ENST00000440769 1046 ntBASIC14.72□□□□□ -0.05
TRBV6-4A0A1B0GX49 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC14.72□□□□□ -0.05
TRBV6-4A0A1B0GX49 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC14.72□□□□□ -0.05
TRBV6-4A0A1B0GX49 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-4A0A1B0GX49 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-4A0A1B0GX49 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV6-4A0A1B0GX49 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC14.71□□□□□ -0.05
TRBV6-4A0A1B0GX49 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV6-4A0A1B0GX49 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV6-4A0A1B0GX49 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC14.71□□□□□ -0.05
TRBV6-4A0A1B0GX49 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
TRBV6-4A0A1B0GX49 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC14.71□□□□□ -0.05
TRBV6-4A0A1B0GX49 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV6-4A0A1B0GX49 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV6-4A0A1B0GX49 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV6-4A0A1B0GX49 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TRBV6-4A0A1B0GX49 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC14.71□□□□□ -0.05
TRBV6-4A0A1B0GX49 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV6-4A0A1B0GX49 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TRBV6-4A0A1B0GX49 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRBV6-4A0A1B0GX49 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRBV6-4A0A1B0GX49 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRBV6-4A0A1B0GX49 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-4A0A1B0GX49 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-4A0A1B0GX49 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-4A0A1B0GX49 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-4A0A1B0GX49 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
TRBV6-4A0A1B0GX49 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-4A0A1B0GX49 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-4A0A1B0GX49 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC14.7□□□□□ -0.06
TRBV6-4A0A1B0GX49 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC14.7□□□□□ -0.06
TRBV6-4A0A1B0GX49 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC14.7□□□□□ -0.06
TRBV6-4A0A1B0GX49 AC138907.5-202ENST00000569484 235 ntBASIC14.7□□□□□ -0.06
TRBV6-4A0A1B0GX49 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC14.7□□□□□ -0.06
TRBV6-4A0A1B0GX49 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-4A0A1B0GX49 AC120498.10-201ENST00000621827 505 ntBASIC14.7□□□□□ -0.06
TRBV6-4A0A1B0GX49 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-4A0A1B0GX49 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-4A0A1B0GX49 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-4A0A1B0GX49 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-4A0A1B0GX49 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
TRBV6-4A0A1B0GX49 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC14.69□□□□□ -0.06
TRBV6-4A0A1B0GX49 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC14.69□□□□□ -0.06
TRBV6-4A0A1B0GX49 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC14.69□□□□□ -0.06
TRBV6-4A0A1B0GX49 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC14.69□□□□□ -0.06
TRBV6-4A0A1B0GX49 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-4A0A1B0GX49 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-4A0A1B0GX49 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-4A0A1B0GX49 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-4A0A1B0GX49 AC006128.1-201ENST00000624704 1661 ntBASIC14.69□□□□□ -0.06
TRBV6-4A0A1B0GX49 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TRBV6-4A0A1B0GX49 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC14.69□□□□□ -0.06
TRBV6-4A0A1B0GX49 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC14.69□□□□□ -0.06
TRBV6-4A0A1B0GX49 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC14.69□□□□□ -0.06
TRBV6-4A0A1B0GX49 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
TRBV6-4A0A1B0GX49 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms