Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
TRBV6-1A0A0K0K1D8 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-1A0A0K0K1D8 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TRBV6-1A0A0K0K1D8 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TRBV6-1A0A0K0K1D8 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-1A0A0K0K1D8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-1A0A0K0K1D8 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
TRBV6-1A0A0K0K1D8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-1A0A0K0K1D8 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-1A0A0K0K1D8 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-1A0A0K0K1D8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-1A0A0K0K1D8 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC15.64■□□□□ 0.09
TRBV6-1A0A0K0K1D8 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC15.64■□□□□ 0.09
TRBV6-1A0A0K0K1D8 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-1A0A0K0K1D8 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC15.64■□□□□ 0.09
TRBV6-1A0A0K0K1D8 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-1A0A0K0K1D8 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
TRBV6-1A0A0K0K1D8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC15.64■□□□□ 0.09
TRBV6-1A0A0K0K1D8 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-1A0A0K0K1D8 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-1A0A0K0K1D8 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-1A0A0K0K1D8 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC15.64■□□□□ 0.09
TRBV6-1A0A0K0K1D8 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-1A0A0K0K1D8 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
TRBV6-1A0A0K0K1D8 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC15.63■□□□□ 0.09
TRBV6-1A0A0K0K1D8 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC15.63■□□□□ 0.09
TRBV6-1A0A0K0K1D8 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TRBV6-1A0A0K0K1D8 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV6-1A0A0K0K1D8 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV6-1A0A0K0K1D8 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC15.63■□□□□ 0.09
TRBV6-1A0A0K0K1D8 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV6-1A0A0K0K1D8 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV6-1A0A0K0K1D8 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC15.63■□□□□ 0.09
TRBV6-1A0A0K0K1D8 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRBV6-1A0A0K0K1D8 AL512408.1-201ENST00000569378 2000 ntBASIC15.63■□□□□ 0.09
TRBV6-1A0A0K0K1D8 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV6-1A0A0K0K1D8 AFG3L1P-217ENST00000557444 2447 ntBASIC15.63■□□□□ 0.09
TRBV6-1A0A0K0K1D8 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRBV6-1A0A0K0K1D8 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV6-1A0A0K0K1D8 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC15.62■□□□□ 0.09
TRBV6-1A0A0K0K1D8 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
TRBV6-1A0A0K0K1D8 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-1A0A0K0K1D8 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-1A0A0K0K1D8 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-1A0A0K0K1D8 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
TRBV6-1A0A0K0K1D8 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-1A0A0K0K1D8 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-1A0A0K0K1D8 AC239859.2-201ENST00000444165 318 ntBASIC15.62■□□□□ 0.09
TRBV6-1A0A0K0K1D8 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC15.62■□□□□ 0.09
TRBV6-1A0A0K0K1D8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC15.62■□□□□ 0.09
TRBV6-1A0A0K0K1D8 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC15.62■□□□□ 0.09
TRBV6-1A0A0K0K1D8 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-1A0A0K0K1D8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC15.62■□□□□ 0.09
TRBV6-1A0A0K0K1D8 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TRBV6-1A0A0K0K1D8 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-1A0A0K0K1D8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC15.61■□□□□ 0.09
TRBV6-1A0A0K0K1D8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-1A0A0K0K1D8 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-1A0A0K0K1D8 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-1A0A0K0K1D8 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-1A0A0K0K1D8 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
TRBV6-1A0A0K0K1D8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TRBV6-1A0A0K0K1D8 AC099778.1-201ENST00000568593 1911 ntBASIC15.61■□□□□ 0.09
TRBV6-1A0A0K0K1D8 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC15.61■□□□□ 0.09
TRBV6-1A0A0K0K1D8 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
TRBV6-1A0A0K0K1D8 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
TRBV6-1A0A0K0K1D8 AK3-203ENST00000447596 705 ntTSL 2 BASIC15.61■□□□□ 0.09
TRBV6-1A0A0K0K1D8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC15.61■□□□□ 0.09
TRBV6-1A0A0K0K1D8 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-1A0A0K0K1D8 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-1A0A0K0K1D8 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-1A0A0K0K1D8 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC15.61■□□□□ 0.09
TRBV6-1A0A0K0K1D8 BX323043.1-201ENST00000641006 1765 ntBASIC15.61■□□□□ 0.09
TRBV6-1A0A0K0K1D8 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
TRBV6-1A0A0K0K1D8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-1A0A0K0K1D8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-1A0A0K0K1D8 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-1A0A0K0K1D8 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-1A0A0K0K1D8 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-1A0A0K0K1D8 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRBV6-1A0A0K0K1D8 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-1A0A0K0K1D8 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC15.6■□□□□ 0.09
TRBV6-1A0A0K0K1D8 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-1A0A0K0K1D8 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-1A0A0K0K1D8 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-1A0A0K0K1D8 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC15.6■□□□□ 0.09
TRBV6-1A0A0K0K1D8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-1A0A0K0K1D8 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
TRBV6-1A0A0K0K1D8 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-1A0A0K0K1D8 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC15.6■□□□□ 0.09
TRBV6-1A0A0K0K1D8 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC15.6■□□□□ 0.09
TRBV6-1A0A0K0K1D8 AL138724.1-201ENST00000606771 1088 ntBASIC15.6■□□□□ 0.09
TRBV6-1A0A0K0K1D8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC15.6■□□□□ 0.09
TRBV6-1A0A0K0K1D8 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TRBV6-1A0A0K0K1D8 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC15.6■□□□□ 0.09
TRBV6-1A0A0K0K1D8 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC15.6■□□□□ 0.09
TRBV6-1A0A0K0K1D8 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
TRBV6-1A0A0K0K1D8 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-1A0A0K0K1D8 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-1A0A0K0K1D8 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms