Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC163A0A0D9SF12 AC069544.1-201ENST00000609399 999 ntBASIC20.86■□□□□ 0.93
CCDC163A0A0D9SF12 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC163A0A0D9SF12 AC003102.1-202ENST00000563394 1796 ntBASIC20.86■□□□□ 0.93
CCDC163A0A0D9SF12 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC163A0A0D9SF12 AC139530.1-201ENST00000575312 1977 ntBASIC20.86■□□□□ 0.93
CCDC163A0A0D9SF12 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC163A0A0D9SF12 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC163A0A0D9SF12 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CCDC163A0A0D9SF12 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC163A0A0D9SF12 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC163A0A0D9SF12 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC163A0A0D9SF12 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC163A0A0D9SF12 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC163A0A0D9SF12 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC163A0A0D9SF12 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC163A0A0D9SF12 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC163A0A0D9SF12 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC163A0A0D9SF12 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC163A0A0D9SF12 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC163A0A0D9SF12 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC163A0A0D9SF12 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC163A0A0D9SF12 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC163A0A0D9SF12 AC211429.1-201ENST00000415277 523 ntBASIC20.84■□□□□ 0.93
CCDC163A0A0D9SF12 SNORA78-201ENST00000459373 127 ntBASIC20.84■□□□□ 0.93
CCDC163A0A0D9SF12 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.84■□□□□ 0.93
CCDC163A0A0D9SF12 LINC01023-201ENST00000606054 436 ntBASIC20.84■□□□□ 0.93
CCDC163A0A0D9SF12 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC163A0A0D9SF12 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC163A0A0D9SF12 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
CCDC163A0A0D9SF12 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CCDC163A0A0D9SF12 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC163A0A0D9SF12 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC163A0A0D9SF12 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC163A0A0D9SF12 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC163A0A0D9SF12 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC163A0A0D9SF12 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC163A0A0D9SF12 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC163A0A0D9SF12 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC163A0A0D9SF12 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC163A0A0D9SF12 AC012618.2-201ENST00000428058 849 ntBASIC20.83■□□□□ 0.93
CCDC163A0A0D9SF12 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC163A0A0D9SF12 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC163A0A0D9SF12 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.83■□□□□ 0.93
CCDC163A0A0D9SF12 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC163A0A0D9SF12 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.83■□□□□ 0.93
CCDC163A0A0D9SF12 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC163A0A0D9SF12 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.83■□□□□ 0.92
CCDC163A0A0D9SF12 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.83■□□□□ 0.92
CCDC163A0A0D9SF12 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC163A0A0D9SF12 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
CCDC163A0A0D9SF12 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.92
CCDC163A0A0D9SF12 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC163A0A0D9SF12 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.83■□□□□ 0.92
CCDC163A0A0D9SF12 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC163A0A0D9SF12 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC163A0A0D9SF12 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC163A0A0D9SF12 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC163A0A0D9SF12 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CCDC163A0A0D9SF12 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
CCDC163A0A0D9SF12 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC163A0A0D9SF12 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC163A0A0D9SF12 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC163A0A0D9SF12 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC163A0A0D9SF12 POM121L13P-201ENST00000422362 380 ntBASIC20.82■□□□□ 0.92
CCDC163A0A0D9SF12 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CCDC163A0A0D9SF12 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC163A0A0D9SF12 SOX15-203ENST00000570788 1093 ntBASIC20.82■□□□□ 0.92
CCDC163A0A0D9SF12 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC163A0A0D9SF12 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC163A0A0D9SF12 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC163A0A0D9SF12 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC163A0A0D9SF12 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CCDC163A0A0D9SF12 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC163A0A0D9SF12 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC163A0A0D9SF12 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC163A0A0D9SF12 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC163A0A0D9SF12 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC163A0A0D9SF12 MIR1224-201ENST00000408193 85 ntBASIC20.81■□□□□ 0.92
CCDC163A0A0D9SF12 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC163A0A0D9SF12 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC163A0A0D9SF12 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.81■□□□□ 0.92
CCDC163A0A0D9SF12 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
CCDC163A0A0D9SF12 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC163A0A0D9SF12 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC163A0A0D9SF12 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.81■□□□□ 0.92
CCDC163A0A0D9SF12 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC163A0A0D9SF12 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.81■□□□□ 0.92
CCDC163A0A0D9SF12 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC163A0A0D9SF12 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CCDC163A0A0D9SF12 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC163A0A0D9SF12 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC163A0A0D9SF12 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
CCDC163A0A0D9SF12 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
CCDC163A0A0D9SF12 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC163A0A0D9SF12 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC163A0A0D9SF12 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC163A0A0D9SF12 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC163A0A0D9SF12 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC163A0A0D9SF12 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms