Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV34A0A0B4J273 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAV34A0A0B4J273 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV34A0A0B4J273 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV34A0A0B4J273 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV34A0A0B4J273 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV34A0A0B4J273 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
TRAV34A0A0B4J273 AL031848.2-201ENST00000607670 837 ntBASIC16.11■□□□□ 0.17
TRAV34A0A0B4J273 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV34A0A0B4J273 AL031602.1-201ENST00000633169 911 ntBASIC16.11■□□□□ 0.17
TRAV34A0A0B4J273 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV34A0A0B4J273 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV34A0A0B4J273 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV34A0A0B4J273 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV34A0A0B4J273 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV34A0A0B4J273 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV34A0A0B4J273 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TRAV34A0A0B4J273 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
TRAV34A0A0B4J273 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TRAV34A0A0B4J273 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV34A0A0B4J273 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TRAV34A0A0B4J273 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV34A0A0B4J273 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV34A0A0B4J273 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV34A0A0B4J273 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV34A0A0B4J273 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRAV34A0A0B4J273 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV34A0A0B4J273 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV34A0A0B4J273 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV34A0A0B4J273 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV34A0A0B4J273 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV34A0A0B4J273 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV34A0A0B4J273 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
TRAV34A0A0B4J273 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC16.1■□□□□ 0.17
TRAV34A0A0B4J273 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV34A0A0B4J273 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV34A0A0B4J273 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV34A0A0B4J273 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV34A0A0B4J273 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
TRAV34A0A0B4J273 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV34A0A0B4J273 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV34A0A0B4J273 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV34A0A0B4J273 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV34A0A0B4J273 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV34A0A0B4J273 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV34A0A0B4J273 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV34A0A0B4J273 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV34A0A0B4J273 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV34A0A0B4J273 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TRAV34A0A0B4J273 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV34A0A0B4J273 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TRAV34A0A0B4J273 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV34A0A0B4J273 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
TRAV34A0A0B4J273 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV34A0A0B4J273 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRAV34A0A0B4J273 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV34A0A0B4J273 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TRAV34A0A0B4J273 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAV34A0A0B4J273 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV34A0A0B4J273 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
TRAV34A0A0B4J273 AL020996.1-203ENST00000536896 2307 ntBASIC16.09■□□□□ 0.17
TRAV34A0A0B4J273 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV34A0A0B4J273 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAV34A0A0B4J273 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV34A0A0B4J273 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV34A0A0B4J273 AC087289.5-201ENST00000586076 3175 ntBASIC16.09■□□□□ 0.17
TRAV34A0A0B4J273 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV34A0A0B4J273 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV34A0A0B4J273 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAV34A0A0B4J273 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAV34A0A0B4J273 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC16.09■□□□□ 0.17
TRAV34A0A0B4J273 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV34A0A0B4J273 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV34A0A0B4J273 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
TRAV34A0A0B4J273 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV34A0A0B4J273 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV34A0A0B4J273 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TRAV34A0A0B4J273 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV34A0A0B4J273 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.08■□□□□ 0.16
TRAV34A0A0B4J273 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TRAV34A0A0B4J273 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV34A0A0B4J273 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV34A0A0B4J273 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
TRAV34A0A0B4J273 HES6-204ENST00000409182 863 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAV34A0A0B4J273 BX664725.1-201ENST00000438252 379 ntBASIC16.08■□□□□ 0.16
TRAV34A0A0B4J273 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC16.08■□□□□ 0.16
TRAV34A0A0B4J273 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TRAV34A0A0B4J273 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV34A0A0B4J273 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.08■□□□□ 0.16
TRAV34A0A0B4J273 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV34A0A0B4J273 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV34A0A0B4J273 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV34A0A0B4J273 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV34A0A0B4J273 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC16.08■□□□□ 0.16
TRAV34A0A0B4J273 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TRAV34A0A0B4J273 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV34A0A0B4J273 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV34A0A0B4J273 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV34A0A0B4J273 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV34A0A0B4J273 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms