Protein–RNA interactions for Protein: A0A0B4J263

TRAV39, T-cell receptor alpha variable 39 (Fragment), humanhuman

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39A0A0B4J263 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV39A0A0B4J263 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV39A0A0B4J263 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV39A0A0B4J263 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV39A0A0B4J263 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV39A0A0B4J263 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV39A0A0B4J263 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV39A0A0B4J263 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV39A0A0B4J263 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TRAV39A0A0B4J263 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV39A0A0B4J263 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.49■□□□□ 0.39
TRAV39A0A0B4J263 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV39A0A0B4J263 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAV39A0A0B4J263 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV39A0A0B4J263 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TRAV39A0A0B4J263 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV39A0A0B4J263 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV39A0A0B4J263 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV39A0A0B4J263 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TRAV39A0A0B4J263 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAV39A0A0B4J263 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRAV39A0A0B4J263 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV39A0A0B4J263 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV39A0A0B4J263 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV39A0A0B4J263 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.49■□□□□ 0.39
TRAV39A0A0B4J263 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.49■□□□□ 0.39
TRAV39A0A0B4J263 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAV39A0A0B4J263 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV39A0A0B4J263 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
TRAV39A0A0B4J263 AC012414.1-201ENST00000556676 535 ntBASIC17.49■□□□□ 0.39
TRAV39A0A0B4J263 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.49■□□□□ 0.39
TRAV39A0A0B4J263 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.49■□□□□ 0.39
TRAV39A0A0B4J263 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV39A0A0B4J263 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.49■□□□□ 0.39
TRAV39A0A0B4J263 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV39A0A0B4J263 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAV39A0A0B4J263 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV39A0A0B4J263 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
TRAV39A0A0B4J263 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV39A0A0B4J263 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.49■□□□□ 0.39
TRAV39A0A0B4J263 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.48■□□□□ 0.39
TRAV39A0A0B4J263 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAV39A0A0B4J263 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAV39A0A0B4J263 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAV39A0A0B4J263 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV39A0A0B4J263 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV39A0A0B4J263 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TRAV39A0A0B4J263 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV39A0A0B4J263 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV39A0A0B4J263 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TRAV39A0A0B4J263 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV39A0A0B4J263 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.48■□□□□ 0.39
TRAV39A0A0B4J263 AC105265.2-201ENST00000467189 838 ntBASIC17.48■□□□□ 0.39
TRAV39A0A0B4J263 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAV39A0A0B4J263 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAV39A0A0B4J263 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.48■□□□□ 0.39
TRAV39A0A0B4J263 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV39A0A0B4J263 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV39A0A0B4J263 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV39A0A0B4J263 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV39A0A0B4J263 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV39A0A0B4J263 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV39A0A0B4J263 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV39A0A0B4J263 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TRAV39A0A0B4J263 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV39A0A0B4J263 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV39A0A0B4J263 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV39A0A0B4J263 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TRAV39A0A0B4J263 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV39A0A0B4J263 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
TRAV39A0A0B4J263 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
TRAV39A0A0B4J263 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV39A0A0B4J263 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV39A0A0B4J263 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV39A0A0B4J263 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV39A0A0B4J263 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV39A0A0B4J263 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV39A0A0B4J263 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV39A0A0B4J263 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV39A0A0B4J263 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV39A0A0B4J263 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.47■□□□□ 0.39
TRAV39A0A0B4J263 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV39A0A0B4J263 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.47■□□□□ 0.39
TRAV39A0A0B4J263 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV39A0A0B4J263 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV39A0A0B4J263 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV39A0A0B4J263 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
TRAV39A0A0B4J263 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV39A0A0B4J263 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TRAV39A0A0B4J263 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV39A0A0B4J263 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV39A0A0B4J263 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
TRAV39A0A0B4J263 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV39A0A0B4J263 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV39A0A0B4J263 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.46■□□□□ 0.39
TRAV39A0A0B4J263 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV39A0A0B4J263 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
TRAV39A0A0B4J263 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.46■□□□□ 0.39
TRAV39A0A0B4J263 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV39A0A0B4J263 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms