Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV13-1A0A0B4J241 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
TRAV13-1A0A0B4J241 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRAV13-1A0A0B4J241 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV13-1A0A0B4J241 CREM-229ENST00000474362 1030 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV13-1A0A0B4J241 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAV13-1A0A0B4J241 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAV13-1A0A0B4J241 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV13-1A0A0B4J241 MIR3181-201ENST00000578512 73 ntBASIC14.53□□□□□ -0.08
TRAV13-1A0A0B4J241 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV13-1A0A0B4J241 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV13-1A0A0B4J241 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV13-1A0A0B4J241 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV13-1A0A0B4J241 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV13-1A0A0B4J241 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV13-1A0A0B4J241 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV13-1A0A0B4J241 AC090340.1-201ENST00000620778 4980 ntBASIC14.53□□□□□ -0.08
TRAV13-1A0A0B4J241 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRAV13-1A0A0B4J241 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV13-1A0A0B4J241 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC14.52□□□□□ -0.08
TRAV13-1A0A0B4J241 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV13-1A0A0B4J241 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV13-1A0A0B4J241 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV13-1A0A0B4J241 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV13-1A0A0B4J241 OR2I1P-207ENST00000453522 948 ntBASIC14.52□□□□□ -0.09
TRAV13-1A0A0B4J241 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV13-1A0A0B4J241 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV13-1A0A0B4J241 AL034346.1-201ENST00000568244 1277 ntBASIC14.52□□□□□ -0.09
TRAV13-1A0A0B4J241 AL356740.2-201ENST00000601559 647 ntBASIC14.52□□□□□ -0.09
TRAV13-1A0A0B4J241 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV13-1A0A0B4J241 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
TRAV13-1A0A0B4J241 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TRAV13-1A0A0B4J241 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV13-1A0A0B4J241 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV13-1A0A0B4J241 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
TRAV13-1A0A0B4J241 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV13-1A0A0B4J241 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV13-1A0A0B4J241 AL049796.1-201ENST00000565336 1766 ntBASIC14.52□□□□□ -0.09
TRAV13-1A0A0B4J241 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
TRAV13-1A0A0B4J241 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
TRAV13-1A0A0B4J241 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV13-1A0A0B4J241 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV13-1A0A0B4J241 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV13-1A0A0B4J241 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
TRAV13-1A0A0B4J241 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV13-1A0A0B4J241 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV13-1A0A0B4J241 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAV13-1A0A0B4J241 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TRAV13-1A0A0B4J241 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
TRAV13-1A0A0B4J241 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV13-1A0A0B4J241 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV13-1A0A0B4J241 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAV13-1A0A0B4J241 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV13-1A0A0B4J241 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV13-1A0A0B4J241 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV13-1A0A0B4J241 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV13-1A0A0B4J241 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
TRAV13-1A0A0B4J241 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAV13-1A0A0B4J241 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV13-1A0A0B4J241 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC14.5□□□□□ -0.09
TRAV13-1A0A0B4J241 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TRAV13-1A0A0B4J241 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
TRAV13-1A0A0B4J241 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV13-1A0A0B4J241 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC14.5□□□□□ -0.09
TRAV13-1A0A0B4J241 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV13-1A0A0B4J241 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV13-1A0A0B4J241 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV13-1A0A0B4J241 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV13-1A0A0B4J241 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV13-1A0A0B4J241 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV13-1A0A0B4J241 AP004607.7-201ENST00000527152 1677 ntBASIC14.5□□□□□ -0.09
TRAV13-1A0A0B4J241 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV13-1A0A0B4J241 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV13-1A0A0B4J241 SRD5A1P1-201ENST00000442297 786 ntBASIC14.5□□□□□ -0.09
TRAV13-1A0A0B4J241 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV13-1A0A0B4J241 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV13-1A0A0B4J241 AC092171.4-201ENST00000609130 632 ntBASIC14.5□□□□□ -0.09
TRAV13-1A0A0B4J241 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV13-1A0A0B4J241 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV13-1A0A0B4J241 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TRAV13-1A0A0B4J241 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV13-1A0A0B4J241 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV13-1A0A0B4J241 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV13-1A0A0B4J241 GATM-206ENST00000558336 1522 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV13-1A0A0B4J241 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV13-1A0A0B4J241 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC14.5□□□□□ -0.09
TRAV13-1A0A0B4J241 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV13-1A0A0B4J241 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV13-1A0A0B4J241 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV13-1A0A0B4J241 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV13-1A0A0B4J241 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV13-1A0A0B4J241 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV13-1A0A0B4J241 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
TRAV13-1A0A0B4J241 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV13-1A0A0B4J241 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV13-1A0A0B4J241 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV13-1A0A0B4J241 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV13-1A0A0B4J241 PARN-205ENST00000539279 1557 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV13-1A0A0B4J241 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC14.49□□□□□ -0.09
TRAV13-1A0A0B4J241 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms