Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
IGHV3-43A0A0B4J1X8 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.33■□□□□ 0.37
IGHV3-43A0A0B4J1X8 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
IGHV3-43A0A0B4J1X8 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
IGHV3-43A0A0B4J1X8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
IGHV3-43A0A0B4J1X8 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
IGHV3-43A0A0B4J1X8 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
IGHV3-43A0A0B4J1X8 IRS3P-201ENST00000223076 1006 ntBASIC17.33■□□□□ 0.36
IGHV3-43A0A0B4J1X8 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IGHV3-43A0A0B4J1X8 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.33■□□□□ 0.36
IGHV3-43A0A0B4J1X8 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
IGHV3-43A0A0B4J1X8 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.33■□□□□ 0.36
IGHV3-43A0A0B4J1X8 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.33■□□□□ 0.36
IGHV3-43A0A0B4J1X8 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
IGHV3-43A0A0B4J1X8 AL358852.1-201ENST00000623174 1268 ntBASIC17.33■□□□□ 0.36
IGHV3-43A0A0B4J1X8 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.33■□□□□ 0.36
IGHV3-43A0A0B4J1X8 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.33■□□□□ 0.36
IGHV3-43A0A0B4J1X8 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
IGHV3-43A0A0B4J1X8 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IGHV3-43A0A0B4J1X8 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
IGHV3-43A0A0B4J1X8 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.33■□□□□ 0.36
IGHV3-43A0A0B4J1X8 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IGHV3-43A0A0B4J1X8 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.32■□□□□ 0.36
IGHV3-43A0A0B4J1X8 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IGHV3-43A0A0B4J1X8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IGHV3-43A0A0B4J1X8 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IGHV3-43A0A0B4J1X8 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IGHV3-43A0A0B4J1X8 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
IGHV3-43A0A0B4J1X8 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.32■□□□□ 0.36
IGHV3-43A0A0B4J1X8 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IGHV3-43A0A0B4J1X8 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IGHV3-43A0A0B4J1X8 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.32■□□□□ 0.36
IGHV3-43A0A0B4J1X8 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.32■□□□□ 0.36
IGHV3-43A0A0B4J1X8 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IGHV3-43A0A0B4J1X8 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IGHV3-43A0A0B4J1X8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IGHV3-43A0A0B4J1X8 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IGHV3-43A0A0B4J1X8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IGHV3-43A0A0B4J1X8 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.32■□□□□ 0.36
IGHV3-43A0A0B4J1X8 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IGHV3-43A0A0B4J1X8 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.32■□□□□ 0.36
IGHV3-43A0A0B4J1X8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
IGHV3-43A0A0B4J1X8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
IGHV3-43A0A0B4J1X8 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
IGHV3-43A0A0B4J1X8 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
IGHV3-43A0A0B4J1X8 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.31■□□□□ 0.36
IGHV3-43A0A0B4J1X8 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IGHV3-43A0A0B4J1X8 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.31■□□□□ 0.36
IGHV3-43A0A0B4J1X8 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IGHV3-43A0A0B4J1X8 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IGHV3-43A0A0B4J1X8 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IGHV3-43A0A0B4J1X8 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.31■□□□□ 0.36
IGHV3-43A0A0B4J1X8 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IGHV3-43A0A0B4J1X8 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IGHV3-43A0A0B4J1X8 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
IGHV3-43A0A0B4J1X8 TPRG1LP1-201ENST00000598702 760 ntBASIC17.31■□□□□ 0.36
IGHV3-43A0A0B4J1X8 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
IGHV3-43A0A0B4J1X8 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IGHV3-43A0A0B4J1X8 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
IGHV3-43A0A0B4J1X8 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.31■□□□□ 0.36
IGHV3-43A0A0B4J1X8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
IGHV3-43A0A0B4J1X8 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IGHV3-43A0A0B4J1X8 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IGHV3-43A0A0B4J1X8 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IGHV3-43A0A0B4J1X8 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IGHV3-43A0A0B4J1X8 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IGHV3-43A0A0B4J1X8 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IGHV3-43A0A0B4J1X8 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IGHV3-43A0A0B4J1X8 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IGHV3-43A0A0B4J1X8 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IGHV3-43A0A0B4J1X8 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.3■□□□□ 0.36
IGHV3-43A0A0B4J1X8 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
IGHV3-43A0A0B4J1X8 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IGHV3-43A0A0B4J1X8 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IGHV3-43A0A0B4J1X8 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
IGHV3-43A0A0B4J1X8 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
IGHV3-43A0A0B4J1X8 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IGHV3-43A0A0B4J1X8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IGHV3-43A0A0B4J1X8 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IGHV3-43A0A0B4J1X8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
IGHV3-43A0A0B4J1X8 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
IGHV3-43A0A0B4J1X8 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.3■□□□□ 0.36
IGHV3-43A0A0B4J1X8 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IGHV3-43A0A0B4J1X8 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.3■□□□□ 0.36
IGHV3-43A0A0B4J1X8 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.3■□□□□ 0.36
IGHV3-43A0A0B4J1X8 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.3■□□□□ 0.36
IGHV3-43A0A0B4J1X8 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
IGHV3-43A0A0B4J1X8 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
IGHV3-43A0A0B4J1X8 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IGHV3-43A0A0B4J1X8 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.3■□□□□ 0.36
IGHV3-43A0A0B4J1X8 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.3■□□□□ 0.36
IGHV3-43A0A0B4J1X8 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IGHV3-43A0A0B4J1X8 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IGHV3-43A0A0B4J1X8 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
IGHV3-43A0A0B4J1X8 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IGHV3-43A0A0B4J1X8 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.29■□□□□ 0.36
IGHV3-43A0A0B4J1X8 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.29■□□□□ 0.36
IGHV3-43A0A0B4J1X8 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
IGHV3-43A0A0B4J1X8 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IGHV3-43A0A0B4J1X8 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms